Sphingobacterium sp. DR205: G6053_30175
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Entry
G6053_30175 CDS
T06466
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
spdr
Sphingobacterium sp. DR205
Brite
KEGG Orthology (KO) [BR:
spdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spdr03019
]
G6053_30175
03009 Ribosome biogenesis [BR:
spdr03009
]
G6053_30175
Messenger RNA biogenesis [BR:
spdr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G6053_30175
Ribosome biogenesis [BR:
spdr03009
]
Prokaryotic type
rRNA processing factors
G6053_30175
SSDB
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Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QIH36857
LinkDB
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Position
complement(7170121..7171674)
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AA seq
517 aa
AA seq
DB search
MVKELIIDSTPDKGVTIALLQDKQLVELNREPANNNFAVGDIYLGRIKRIMPGLNAAFVD
VGYEKDAFLHYLDLGPQVQSLLKLTRIVKNGSYQEKLLNSLKLEKDIDKAGKISDVLSKN
MLVPVQIAKEPISTKGPRLSSDLSIAGRFVVLVPFSSTVSISKRIKGSNERNRLKKIVEG
IKPANFGVIIRTVSEGKGVEELQRDLLDLISKWELFTKRLRNAEPPQKVLGEMDRASTIL
RDILTDEFSHIYVNDPSIFEETKSYIHDISPDLEKIVKLYKHKEPIFDHFGVEKQIKAAF
GKTVTLPGGAYLVIEHTEALHVIDVNSGNRSANKENQEDNALLVNMEAAKEIARQLRLRD
MGGIVVIDFIDMHKPNHRKELYTFLKECMVSDRARHTILPPSKFGLVQITRQRVRPEMNI
VTNEKCPACDGTGEIRSSIVLMDDIENNLSFILQEQNEKKVTLCVHPYIDAYIKSGLISK
RMKWFMKYGKWIKVNPMTSYYLTEFHFFNAKDEEIKL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaggaattaattatcgattcaactcctgataaaggggtaactattgctttacta
caggacaagcagctcgttgaacttaaccgtgagcccgcaaataacaattttgccgttggg
gatatctatctcggacggattaagcgaattatgccggggctaaatgcggctttcgtagat
gtaggctacgaaaaggacgcttttctacattatttagatttgggtccccaagttcaatct
ttgcttaagcttacgcgtatcgtaaagaatggcagttatcaagagaaactgctcaatagt
ttaaaacttgaaaaggatatcgataaagctggtaagatctctgatgtcttgagcaaaaat
atgctcgtgccagtacaaatcgccaaagaacccatctcaacaaaaggacctcgtctgagc
tcagacctatcaattgcaggtcgttttgtcgttttggtgcctttctcaagtactgtttcc
atttccaagcgtatcaaaggcagtaacgaacgcaaccgcctcaaaaagattgtcgaaggt
attaaaccagctaattttggtgtaatcatccgtacagtctccgaaggaaagggtgtcgaa
gaactgcaacgtgacttattggacctgatctcaaaatgggagctatttaccaaacgtctt
cgaaatgctgaaccaccacaaaaggttctcggcgaaatggatcgcgcatccactattcta
cgggatatcctaacggatgagttctcgcatatttatgttaatgatccttcgatcttcgaa
gaaacaaaatcatatatacacgatatatctccggatctggagaaaattgtaaaactttac
aaacataaagaaccaattttcgaccatttcggagttgaaaagcaaatcaaggcagctttt
ggcaagactgttactttgcccggcggcgcgtatctcgttattgagcataccgaagccctg
catgtaatcgatgtcaatagtggtaaccgttctgccaataaggagaatcaggaggataat
gcattgctggtcaatatggaagcagcaaaggaaattgcgcggcaactgcgcctgcgtgat
atggggggaattgtagtcatcgatttcattgatatgcataagcccaatcaccgaaaagag
ttgtatacattcttaaaagaatgtatggtgtcggatagggcgaggcatacgattttgcca
ccaagtaaatttggtctggtgcagatcacccgccagcgtgtaagacctgaaatgaatatt
gtcacaaacgagaaatgtccggcttgtgatggtacaggagaaatccgatcaagtattgtc
ctaatggatgatattgaaaataatttgagttttattcttcaagaacagaatgagaaaaag
gtgaccttatgtgttcacccgtacatagacgcctacattaagtctggtctgatttctaaa
agaatgaaatggtttatgaagtacggtaaatggattaaagtaaatccaatgacgtcatat
tatctaactgaattccactttttcaatgcgaaagacgaggaaatcaagttataa
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