Serratia proteamaculans: Spro_0160
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Entry
Spro_0160 CDS
T00595
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
spe
Serratia proteamaculans
Pathway
spe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Spro_0160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spe03021
]
Spro_0160
03019 Messenger RNA biogenesis [BR:
spe03019
]
Spro_0160
Transcription machinery [BR:
spe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Spro_0160
Messenger RNA biogenesis [BR:
spe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Spro_0160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
S1CSD-TOTE-2
AAA_22
OB_RNB
AAA_25
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ABV39270
UniProt:
A8G830
LinkDB
All DBs
Position
180578..181837
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDSVSGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaatcttgcccgcatgcgcaagcaggacattatcttctctatccttaag
caacatgcgaaaagtggagaagatatcttcggcgatggcgtgttggagatattgcaggat
ggatttggtttcctccgttctggagacagttcctaccttgcaggccccgacgacatctac
gtatcccctagccaaatccgccgttttaacctccgtacaggtgactccgtttccggtaag
attcgtccgccaaaagaaggcgagcgctactttgccctgttgaaagttaacgaagttaac
tacgacaaaccggaaaacgcccgtagcaagatcctgttcgaaaacctgaccccactgcat
gccaactcccgtctgcggatggaacgcggcaacggctcaaccgaagatctgacagcacgc
gtgctggacctggcttcgccgattggtcgtggtcaacgtggtctgattgttgctccgcca
aaagccggtaaaaccatgctgctgcagaacattgcgcagagcatcgcttacaaccatcca
gactgcgtgctgatggtcctgctgatcgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaagggtgaagttatcgcttctacctttgacgagccggcatctcgccacgtt
caggttgcagaaatggtgattgagaaggccaagcgtctggttgagcacaagaaagacgtg
atcatcctgcttgactccatcactcgtctggcgcgtgcctacaacaccgtggtaccggct
tccggtaaagtgttgaccggtggtgtggatgccaatgccctgcatcgtcccaagcgtttc
ttcggtgcggcacgtaacgttgaggaaggcggcagcctgaccatcatcgctaccgcgctg
gtcgataccgggtcgaaaatggacgaagttatctacgaagagtttaaaggtaccggcaac
atggaattgcatctggcgcgtaaaatcgccgagaagcgcgtattccctgctatcgattac
aaccgctctggtacccgtaaagaagaattactcaccacctctgaagaactgcagaaaatg
tggatcctgcgtaaaatcattcacccgatgggtgagattgatgcgatggaattcctcatt
aacaagttggccatgaccaagaccaacgatgaattcttcgatatgatgaagcgctcataa
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