Serratia proteamaculans: Spro_0495
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Entry
Spro_0495 CDS
T00595
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spe
Serratia proteamaculans
Pathway
spe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Spro_0495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spe03019
]
Spro_0495
03009 Ribosome biogenesis [BR:
spe03009
]
Spro_0495
Enzymes [BR:
spe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Spro_0495
Messenger RNA biogenesis [BR:
spe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Spro_0495
Ribosome biogenesis [BR:
spe03009
]
Prokaryotic type
rRNA helicases
Spro_0495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
UTP25_NTPase-like
Cas3-like_C_2
DRTGG
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABV39603
UniProt:
A8G913
LinkDB
All DBs
Position
547552..549513
Genome browser
AA seq
653 aa
AA seq
DB search
MTTELETSFADLGLSAPIISALTDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA
FSLPLLHNLDASLKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAEIPA
EHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVQGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
IERTMKLTIPEVELPNVELLGERRLAKFAAKVQQQLESSDLDMYRGLLAKLQPGEEELEM
ETLAAALLKMAQGERPLILPPDPVFKPRQRREFNDRDDRGSDRRRDARPDSRDGGAERPR
RERRDVGEMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFAGHSTIELPKGM
PGEILSHFTRTRILNKPMNMQLLGDAQPHERRERPAPAGNGERRGGARPFNGERREGANP
GRRSFGDRREGGAAAPAGNGGERRGGNFNRDGQRAPRRDDAAPAAPRRRFGDA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgactactgagcttgaaacctcttttgctgacctggggctgtctgctccgatcatttct
gccctgaccgatctgggctacgaaaaaccttcaccgatccaggctgagtgtattcctcac
ctgttgaacggccgtgatgtgctgggcatggcacagaccggtagcggcaaaactgcggcg
ttctcgctgccactgctgcacaaccttgacgcttccctgaaagcacctcagatcctggtg
ctggcaccgacccgcgaactggcggttcaggttgctgaagcgatgaccgatttctccaaa
cacatgcatggcgttaacgtcgtggccctgtacggcggccagcgttatgacgtgcagctg
cgcgctctgcgtcagggcccgcaaatcgtagtagggactccaggccgtctgctggaccac
ctgaagcgtggcaccctgaacctctctaacctgagcggtctggtgctggatgaagccgac
gaaatgctgcgtatgggctttatcgaagacgtagaaaccatcatggcagagatcccggct
gaacatcagaccgcactgttctctgcaaccatgccggaagctatccgtcgcattacccgc
cgctttatgaaagagccgcaggaagtgcgcattcaatcgagcgtgactacccgtccagac
atcagccagagctactggactgtgcagggcatgcgtaaaaacgaagccctggtacgtttc
ctggaagctgaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctg
gaagtggccgaagcgctggagcgcagtggttacagcagcgcggcactgaacggtgacatg
aaccaggccctgcgtgagcagaccctggagcgtctgaaagatggtcgtctggatatcctg
atcgcgaccgacgttgctgcccgtggcctggacgttgagcgtatcagcctggttgtgaac
tacgacatccctatggattccgagtcttacgttcaccgtatcggccgtactggccgtgct
ggtcgtgccggccgtgcgctgctgttcgtagaaaaccgcgaacgccgcctgctgcgtaac
atcgaacgcaccatgaagctgaccattccagaagttgaactgccaaatgtagaactgctg
ggtgagcgtcgtctggccaagttcgcagctaaagtacagcaacagctggaaagcagcgat
ctggacatgtaccgtggcctgctggctaaactgcagccgggcgaagaagagctggaaatg
gaaacgctggccgcagcactgctgaaaatggcacagggcgaacgtcctctgatcctgcca
ccggatcctgtcttcaaaccacgtcagcgtcgtgagttcaacgaccgtgacgaccgcggt
agcgaccgtcgtcgtgacgcacgtccagacagccgtgacggtggcgctgagcgtccacgt
cgtgaacgtcgtgacgttggcgaaatgcagctgtaccgcattgaagtgggccgtgatgat
ggcgttgaagttcgtcatatcgttggcgcgatcgctaacgaaggcgacatcagcagccgt
tacattggtaacatcaagctgtttgccggccactcaactattgagctgccaaaaggcatg
ccgggcgagatcctgtctcacttcacccgtacccgcatcctgaacaagccgatgaacatg
caattgctgggcgatgcacagccgcacgaacgtcgtgagcgtcctgcacctgccggtaac
ggtgagcgtcgtggcggggctcgtccattcaacggcgaacgtcgtgaaggggcaaaccca
ggccgtcgttctttcggtgatcgtcgtgaaggcggtgctgctgcacctgccggcaacggt
ggcgagcgtcgtggcggtaacttcaaccgtgacggccaacgcgcaccacgtcgtgatgac
gccgctccggctgcaccacgtcgtcgcttcggtgatgcataa
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