Serratia proteamaculans: Spro_1726
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Entry
Spro_1726 CDS
T00595
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
spe
Serratia proteamaculans
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spe01002
]
Spro_1726
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spe01011
]
Spro_1726
Peptidases and inhibitors [BR:
spe01002
]
Cysteine peptidases
Family C82
Spro_1726
Peptidoglycan biosynthesis and degradation proteins [BR:
spe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Spro_1726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABV40830
UniProt:
A8GCJ0
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All DBs
Position
1898453..1900294
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AA seq
613 aa
AA seq
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MLLRNGNTVRRLALSCAIACGLASSLPVWATVPAFPVASSGMSVAQSRSELLAALPKGIT
PYYLSTLAPLYAANRMQLMWQDREAVQQFQQQLAELAMSGVQPQFTQWVKLLTNPAITDV
ARDVVLSDAMLGYLQFVSSIGANGNNWLYSNIPYKLGLPPNTVINQWQLALRQGKTLAYV
NTLAPQHPQYAKMHQALRDMLADGRPWPQMANGPSLRPDQLSSDIPALREILARNGMLTP
STAPVEVQDPPAVLTGSRNEPDDGGLSVDEEKSRDSQSAVVSPAAAPVKDLVPTPQSPFS
QQSESPVTVTDNRYTPDLVEGVKRFQKWQGLSADGVIGVRTREWLNVTPQIRASLLALNI
QRLRILPGHVDTGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNP
PWNVPTTLVREDIVPKAMRDGSYFQKHGYTVLSGWSNDAEVINPAMIDWSMISPRNFPYR
IRQAPGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLL
QDAGWNNTRVSSTLKQGNTTFVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDDTVRS
GAQILAQAEKLMQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttagaaatggaaacactgtgcggcgtctggcgttaagttgcgcaatcgcatgt
ggtcttgcgtcgtcgttacccgtatgggcaaccgttcctgcgtttccggtggcgtcatcc
ggcatgtcagttgcgcaaagccgttcggaactgcttgcggcattgccgaagggcattaca
ccctattatctttcgacgctggctcctttgtacgcggcgaaccggatgcaattgatgtgg
caggatcgcgaagcggttcagcaatttcagcagcaactggccgaattggcgatgtccggc
gtacagccgcagtttacccaatgggtgaagctgttgaccaacccggcgattaccgacgtg
gcgcgcgatgtggtgctgtctgatgcgatgctgggctatttacagtttgtttcgtccatc
ggtgccaacggtaataattggctgtacagcaacattccctacaagcttggtctgccaccc
aatacggtgattaaccagtggcaattggcgctgcgtcagggcaagactctggcttatgtc
aatacgctggcgccgcagcatccgcaatacgccaagatgcatcaggccctgcgggatatg
ctggccgatggccgtccgtggccacaaatggccaatggcccaagcctgcgtccggatcaa
ctgagtagtgatattcctgccttgcgtgagatcctggcgcgtaacggcatgctgacgcct
tctacggcaccggtggaagtgcaggatccccctgcggtattgaccggttcgcgtaatgag
cctgacgacggcggcctgtcagtagatgaagaaaaaagtcgtgacagtcagagtgccgtt
gtcagcccggccgccgccccggtcaaagatctcgtcccaacgccgcaatcgcctttttcg
cagcagtcagaaagcccggtgaccgttaccgataatcgctatactcccgacctggtggag
ggcgttaagcgtttccagaaatggcagggtctgagtgctgacggcgtcattggcgtgcgc
actcgcgagtggcttaacgtaacgccgcaaatacgagcctcgttgttggcgctgaatatc
cagcggttacgcatactacccggccatgtcgataccggtattatggttaacattcctaac
tactcgttgacctactaccaaaacggcaatgaagtgctttcctctcgggtgatcgtgggt
cgacctagccgcaagacgccgttgatgagcagcgcattgaataatgtggtggtgaacccg
ccgtggaacgtacctactacgctggtgcgtgaagatatcgtgccgaaggcgatgcgtgac
ggcagctacttccagaagcatggctataccgtgctctcggggtggagcaacgatgccgag
gtgattaatccggcaatgatcgactggagtatgatttcgcctcgtaatttcccgtatcgg
atccgtcaggctccgggagcgaccaactcattggggcgttttaaattcaacatgccgagt
tcggacgctatctatctgcacgatacgcccaaccataatctgttccagaaggacatccgc
gccttaagttccggctgtgttcgggtcaacaaggcttcggatttggcgaatatgctgctg
caggatgccggctggaacaacacccgtgtttcttccaccctgaaacagggaaataccacc
ttcgtaaatatccgccagcatattccggttaaattgtattatttaaccgcctgggtctct
gatgatggaaaaccacaattccgcacagatatttacaattatgatgacacggtgagatcg
ggcgcacaaattttggctcaggccgaaaaattaatgcaataa
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