Serratia proteamaculans: Spro_1938
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Entry
Spro_1938 CDS
T00595
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
spe
Serratia proteamaculans
Pathway
spe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Spro_1938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spe03400
]
Spro_1938
DNA repair and recombination proteins [BR:
spe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Spro_1938
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
ABV41041
UniProt:
A8GD51
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All DBs
Position
complement(2123508..2124176)
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AA seq
222 aa
AA seq
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MNLRVIDTETCGLEGGVVEVASVDLIDGQIANPMSDLISPDRPIGIEAMAIHHITEQMVE
GKPRIAVAIGRYQGSPYYVAHNAAFDRGVLPEMHGAWICTMKLARNLYPDIKYGNQYLRY
ALNLDVQLPQDTTLYPHRALYDCYVTAALLQRIIKDSGWTPEQMAQITDQPVLLKKFKFG
KYRGQEIDRVAQEDPGYLRWMLKSIEDLSPDMKHTLKYYLIG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacgcgtaatagacactgaaacctgcggactggaaggcggcgtggtagaggtg
gcctctgttgatctgatcgacggacagatcgccaacccaatgagcgatttaatcagcccc
gaccgcccaattggcattgaggccatggccattcaccatatcaccgagcagatggtcgaa
gggaaaccgcgcatcgcggtagcgattggtcgctatcagggcagtccctactatgtcgcg
cacaatgcggcattcgatcgcggcgtgttaccagaaatgcacggcgcctggatctgtacc
atgaaactggcgcgcaacctgtacccggacatcaaatacggcaaccaatatctgcgctat
gcgctgaatctcgatgttcaattgccgcaggacaccacgctttacccacatcgggcgtta
tacgactgctacgtcaccgccgcgctattgcaacgcatcatcaaggattcaggttggacg
ccagaacagatggcgcaaattactgaccagccagtactgctgaagaagtttaagttcggt
aagtatcgtggacaggaaattgatcgcgtcgcgcaggaagatcccggctatttgcgctgg
atgctgaaatctatcgaagacctcagtccggacatgaagcacacgctgaaatactatctg
attggttga
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