Serratia proteamaculans: Spro_2595
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Entry
Spro_2595 CDS
T00595
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
spe
Serratia proteamaculans
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spe03019
]
Spro_2595
Enzymes [BR:
spe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Spro_2595
Messenger RNA biogenesis [BR:
spe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Spro_2595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
WHD_HA2
T2SSE
NACHT
nSTAND3
nSTAND_NTPase5
PhoH
AAA_16
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ABV41696
UniProt:
A8GF06
LinkDB
All DBs
Position
complement(2853279..2857166)
Genome browser
AA seq
1295 aa
AA seq
DB search
MKSPLAALSAQLGELMLRDQQRLQRRLQGARKIKNPDAQLAAAVEIESDMALALRKVQSR
AATCPKITYPENLPVSQKKQDILQAIRDHQVVIVAGETGSGKTTQLPKICLELGRGVKGL
IGHTQPRRLAARTVANRIADELETPLGGSVGYKVRFNDQVGENTLVKLMTDGILLAEIQQ
DRLLMQYDTLIIDEAHERSLNIDFILGYLRELLPKRPDLKVIITSATIDPQRFSRHFNNA
PIIEVSGRTYPVEVRYRPVVDDADDTDRDQLQAIFDAVDELGREGPGDILIFMSGEREIR
DTADALNRLNLPHTEVLPLYARLSNSEQNRVFQSHHGRRIVLATNVAETSLTVPGIKYVI
DPGTARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVSDGICIRLYAEQDFLSRPEFT
DPEILRTNLASVILQMTSLGLGDIAAFPFVEAPDKRNILDGVRLLEELGAIKTAENGHYQ
LTAQGRQLAQLPIDPRLARMVLEAQKSGSVREVMIITAALSIQDPRERPMDKQQASDEKH
RRFADKDSDFLAYVNLWDWLKEQQKEHSSSQFRRLCRNDFLNYLRVREWQDIYTQLRQVV
KELGLPVNSEPSDYRSVHTALLTGLLSHIGQKDVDKQEFTGARNARFSIFPGSGLFKKPP
KWTMVAELVETSRLWGRIAARIEPEWIEPLAQHLVKHSYSEPHWSKSQGAVMASEKVTLF
GLPIVAARSVNYSTIDPLLCRELFIRHALVEGDWQTRHAFFAANLKLRAEVEELEHKSRR
RDILVDDETLFAFYDQRIPNDVVSGRHFDNWWKNAGKQNSDLLSFEKEMLIKDGANQVSA
LDYPNTWYQGNLKLRLTYQFEPGTDADGVTVHIPLPILNQVEQQGFEWQIPGIRRELIIA
LIKSLPKPVRRNFVPAPNYAEAFLGRATPLEMPLLDSLERELRRMTGVTVSREDWQWDQV
PDHLKMTFRVVGEKHKTLLEGKDLTALKLKLKDKVQETLSAVADDGLEQSNLHIWSFGKL
PEFYEQKRGGYSMKAYPALVDEKDSVAIRLFDSEQEQRQAMWQGTRRLLLLNIPSPIKYL
HEKLPNKAKLGLYFNPYGRVLDLIDDCISCGIDKLIAEHGGPVWQEENFARLQELVRGEL
NETVVGVAKQVEQILTAVFNINKRLKGRVDISLALALSDIKTQLGALVYRGFVTNNGWKR
LPDTLRYLQAIERRLEKLAIDPHRDRAQMLRVEQVQQAWQQWLNKLPPKRQQDDEVKEVR
WMIEELRVSLFAQQLGTPYPISDKRILQTIEQLSV
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatctccgctcgcggcattgtctgcccaactgggcgagctgatgctccgtgatcaa
cagcgcctgcaacgtcggctgcagggcgcacgaaaaatcaaaaatcccgatgctcaattg
gcggctgccgttgaaatcgaaagtgacatggcgctggcgttgcgtaaggtgcaatcccgc
gctgcgacctgcccgaaaataacctatccggaaaacctgccggtcagccagaaaaagcag
gatattctgcaggcgatccgtgaccatcaggtggtgattgttgccggtgaaaccggctcg
gggaaaaccacccagttaccgaagatctgcctggagttggggcgcggggtcaaagggctg
atcggccacacccagcctcgacgcctggccgcgcgcaccgtggccaaccgcattgccgac
gaactggaaaccccattgggcggcagcgtcggttataaggtacgttttaacgatcaggtc
ggggaaaataccctggtcaagctgatgaccgacggcatcctgctggcggaaatccagcag
gatcggctgttgatgcagtacgacacgctgattatcgatgaggcgcatgaacgcagcctg
aacatcgattttatccttggctacctgcgcgaactgctaccgaagcgcccggatctgaaa
gtcatcatcacctcggcaaccatagatccgcagcggttttcacgtcacttcaacaacgcg
ccgattattgaagtttccggccggacttatccggtggaagtccgttaccgcccggtggtg
gacgacgccgacgataccgaccgcgatcaactgcaggcgattttcgatgcggtggacgaa
cttggccgcgaagggccgggggatatcctgatctttatgagcggtgagcgcgaaatccgt
gataccgctgacgcattgaatcgcctcaatctgccacataccgaagtcttgccgctgtat
gcccgactgtccaacagcgaacagaaccgggtattccagtcacaccacgggcggcgcatt
gtgctggccaccaacgtggcggaaacctcattaaccgtaccgggcatcaagtatgtgatt
gatccggggacggcgcgtatcagccgctacagcttccgtaccaaggtacagcgactgccg
atcgagccggtgtcgcaggcctcggccaaccagcgtaagggccgctgcggccgtgtgtcg
gacggtatttgtattcgcctgtatgcggaacaggatttcctgtcgcgaccggagtttacc
gatccggagatcctgcgcaccaatctggcgtcggtgattttgcagatgacctcgctcggg
ctgggcgacattgccgcattcccgttcgtggaagcgccggacaaacgcaatattctggac
ggcgtgcgcctgctggaagaattgggggcgattaaaacggcagagaatggtcactaccag
ctcaccgcccagggccgtcaattggcacagttgccgatcgacccacgcctggcgcgtatg
gtgctggaagcgcagaagagcggtagcgtgcgcgaggtgatgattatcaccgcggcgttg
tcgattcaggatccgcgtgaacggccaatggacaaacagcaggcgtcggatgaaaagcac
cgtcgcttcgcggataaagactcggacttcctggcctacgtgaacctgtgggactggctg
aaagagcagcaaaaagagcattcctccagccagttccgtcggctgtgccgcaatgatttc
ctgaactacctgcgggtgcgcgaatggcaggatatttacacccaactgcgtcaggtggtg
aaagagctggggctgccggttaacagcgaaccttccgattaccgcagcgtacatactgca
ctgctgactggcttgctgtcgcacatcggtcagaaagatgtcgacaagcaggagttcacc
ggtgcccgcaatgcgcgtttctccatcttcccgggttccggcctgttcaagaagccgccg
aagtggaccatggtggccgaactggtggaaaccagccgtctgtgggggcgtattgccgca
cgtatcgagccggaatggatagaaccgctggctcagcatctggtgaagcacagctacagc
gaaccccactggtccaaatcccagggggcggtgatggccagcgaaaaggtaacgctgttc
gggttgccgatcgttgccgcgcgctcggtcaattacagcaccattgatccgctgctgtgc
cgtgagctgtttatccgccatgcgttggtggaaggtgactggcagacgcgacatgcgttc
tttgccgctaacctgaaactgcgtgccgaagtggaagagctggaacataaatcgcgtcgc
cgtgacattctggtggacgacgaaaccctgtttgctttctacgatcagcgcattccgaac
gatgtggtgtccggacgccatttcgataactggtggaaaaacgccggtaagcaaaattca
gatctgctcagctttgaaaaagaaatgctgatcaaagacggtgccaatcaggtcagtgcg
ctggactacccaaatacctggtaccagggcaacctcaagctgcgcctgacctaccagttt
gaaccgggcaccgacgccgatggcgtgacggtacacattccactgcctattcttaatcag
gttgagcagcagggcttcgaatggcagatcccgggcattcggcgggaactgatcattgcc
ttgatcaagtccttgccgaagccggtacgccgcaactttgtgccggcaccgaactacgcc
gaagctttcctggggcgggcgacgccgctggagatgccgctgctggattcactggagcgc
gagctgcgtcgcatgactggtgtgacggtgtcacgtgaagactggcaatgggatcaggtg
cccgatcacctcaagatgacattccgggtggtgggtgaaaaacacaaaaccctgcttgaa
ggcaaagatctgacggcattgaagctcaagctgaaggacaaggtgcaggaaacgctgtcg
gcggtggcggacgatgggctggaacaaagcaatctgcatatctggagcttcggtaaactg
ccggagttttatgagcagaagcgcggtggctactcgatgaaggcttacccggcgctggtg
gacgaaaaagacagcgtggcgatccgcctgttcgacagcgagcaggagcagcgacaggcg
atgtggcagggcacgcgtcgcctgctgttgttgaatattccgtcacctatcaaatatctg
catgaaaaactgccgaacaaggccaagctggggctgtactttaacccttacggcagggtg
ctggatctgatcgacgattgcatttcgtgcggcatcgataaactgatcgcagaacacggc
gggccggtgtggcaggaagaaaactttgcccgtctgcaggaactggtgcgcggcgaactg
aatgaaacggtggtgggcgtagccaaacaggtcgaacaaatcctgacggcggtgtttaac
atcaacaagcgcttgaaaggccgggttgatatctcgttggcgctggcactgtcagatatc
aaaactcagctcggcgctctggtttatcgtgggttcgtcaccaacaacggctggaagcgc
ctgccggatacgctacgttatctgcaggcgattgaacgtcggttggagaaactggctatc
gatccgcaccgcgaccgcgcgcaaatgctacgggtggaacaggtgcagcaggcctggcag
caatggctgaacaaactgccgccgaaacgccagcaggatgacgaggtgaaagaggtgcgc
tggatgattgaagagctgcgcgtcagcctgttcgctcagcaactgggcacgccttatccg
atctcggacaagcgtatcctgcagactatcgagcagctttcagtgtaa
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