Serratia proteamaculans: Spro_2638
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Entry
Spro_2638 CDS
T00595
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
spe
Serratia proteamaculans
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spe03016
]
Spro_2638
Enzymes [BR:
spe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Spro_2638
Transfer RNA biogenesis [BR:
spe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Spro_2638
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
Motif
Other DBs
NCBI-ProteinID:
ABV41739
UniProt:
A8GF49
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Position
2904549..2906483
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRV
SATLHTEKEREIAEPETLIEPFLSRFVGRVQKRDDRLSIVPDHPLLKDAIQCRPVRGLNH
NFQAGDWAVAEMCRHPLKGDRGFNADLTQFITDGEDHLAPWWVTLARHNLEKEAPEMIAI
SEPDASLPREDLTALNFVTIDSASTEDMDDALFVQDNGDGSLQLTIAIADPTAYVEQGSP
LDEIARKRAFTNYLPGFNIPMLPRDLSDNLCSLRPNQRRPVLACRVTIGADGALADDIRF
FAAEIESKAKLVYDEVSDWLEGIAGWQPPSDDIAQQITLLKRVCDVRNSWRHQHALVFKD
RPDYRFVLGEKGEVLEIVTEQRRTANRIVEECMIASNVCAAIVLRDRLGFGIYNVHTGFD
PLLVEQAVTVLQANGVEADAEKLLTLDGFCELRRHLDSQPTQFLDSRIRRSQTYAEISTT
PGPHYGLGLEAYATWTSPIRKYGDMVNHRLLKAIIAEQPAEKPQDEVTVQLAERRRLNRM
AERDVGDWLYARYLKDKAGTDERFNAEIIDVTRGGLRVRLLDNGAVAFIPAPFIHAVRDE
MVCSQETGTVQIKGEVVYRQGDNLQVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagcttaaacagcaacttcactctcagaccccg
cgcgttgaaggcgtagtaaaagggactgagaaaggctttggctttcttgaagtagacggt
caaaaaagctatttcattccgccaccgtacatgaagaaagtcatgcacggcgaccgggtg
agcgcgactctgcacaccgagaaagagcgcgaaatcgccgagccggaaactctgatcgag
ccattcctgtcgcgctttgttggccgagtgcaaaagcgcgatgaccgcttgtcaatcgtg
cccgatcatccgttgctgaaagacgcgattcagtgtcgtcccgtgcgtggcctgaaccac
aatttccaggccggtgactgggcagtggcagaaatgtgtcgccacccgctgaaaggcgac
cgcggtttcaatgccgatcttacccaattcattaccgatggtgaagatcacctggcgcca
tggtgggtcacgctggcccgtcataatctggaaaaagaagctccggagatgatcgccatc
agcgagccggatgcttcactgccgcgtgaagacctgactgcgctgaattttgtcaccatc
gacagtgccagcaccgaagatatggacgatgcgttgttcgtacaggacaacggtgacggc
tcactgcaattgaccatcgccattgccgatccgaccgcctacgtcgagcaaggtagccca
ttggatgaaatcgcccgcaagcgcgccttcaccaactacctgccgggcttcaatatccct
atgttgccacgcgatctgtcagacaacctgtgttcactgcgcccgaaccaacgccgtccg
gtattggcctgccgcgtgaccatcggtgccgacggcgccctggctgacgacattcgcttc
ttcgccgccgagattgagtcaaaagccaaactggtttatgacgaagtgtccgactggctg
gaaggcattgccggctggcaaccgccaagtgacgacattgcacagcaaatcaccctgctc
aagcgtgtgtgtgacgtgcgtaattcctggcgccaccagcacgctctggtatttaaagat
cgccctgactaccgctttgttctgggcgaaaaaggcgaagtgctggagatcgtcaccgag
cagcgccgcacggccaaccgtatcgttgaagagtgcatgattgcttccaacgtttgcgcc
gctatcgtgctgcgcgaccgtctcggcttcggcatttacaacgtgcataccggtttcgat
ccgctgctggttgagcaggcggttaccgtgctgcaggccaacggcgtggaagccgatgcc
gagaaattgctgacgctggacgggttctgcgaactgcgccgtcacctggattcacagccg
acccagttcctcgacagccgcatccgtcgttcccaaacttatgccgagatcagcaccaca
ccgggcccgcattatggcctggggctggaagcctacgccacctggacctcaccgatccgt
aaatacggcgatatggttaaccaccgtctgctgaaagccattatcgccgagcagcccgcc
gaaaaacctcaggatgaagtcaccgtccaactggcagagcgccgtcgtctgaaccgcatg
gcggagcgcgacgtgggtgactggttgtacgctcgctatctgaaagataaagccggcacc
gatgagcgcttcaatgccgagatcatcgacgtgacccgcggcggcctgcgtgtacgcctg
ctggacaacggcgcagtggcctttatcccggctccatttattcacgcggtgcgtgatgaa
atggtctgcagccaggagaccggcacggttcagatcaaaggcgaagtcgtctatcgccag
ggggataacctgcaggtcaccatcgccgaagtgcgcatggaaacccgcagcgtgatcgcc
agaccggcggcctaa
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