Serratia proteamaculans: Spro_3547
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Entry
Spro_3547 CDS
T00595
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
spe
Serratia proteamaculans
Pathway
spe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Spro_3547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spe03000
]
Spro_3547
03400 DNA repair and recombination proteins [BR:
spe03400
]
Spro_3547
Enzymes [BR:
spe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Spro_3547
Transcription factors [BR:
spe03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Spro_3547
DNA repair and recombination proteins [BR:
spe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Spro_3547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABV42643
UniProt:
A8GHQ3
LinkDB
All DBs
Position
complement(3918942..3920480)
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AA seq
512 aa
AA seq
DB search
MSESRTSAHQPSRIMNKKLTPSLAMKNQQQALYQALSARDRKFDGRFFVGVSSTGIYCRP
VCSARTPKIENCTFYPSAAAAELAGFRPCLKCRPELAPGLALIDLGNRYAQVAVQLIEQG
YLSEHSCEQLAARLGISDRHLRRIFADQFGASPIDYAQSHRLLQAKRLLADTDMPLSEVA
FAAGFGSLRRFNELFKARYRLIPSALRSSSGRNERTVASGLVFHLGYRPPYDWPRMLSFL
QTRAVSGVEKVEGQQYLRAIAITQGGIDYHGWVSVQPEESHNRVRVEIAPALSRVTTEVL
RRIRQLFDLDAAPDLIVQALGQLAADAPGLRLPGCVNGFEQATRAVLGQLVSVKMAATFA
GCMAERWGTPLEQPYAGITHVFPNAEQVARLQPEELRPLGVQLKRAAALIAIARAVTEGR
LQLENVLDIEQGIKALTALPGIGSWTACYIAMRAWSWPDVFLTGDYLIKQRFPGMTPRQI
ENYAECWRPWRSYATLHLWHNQGWVPSTDTDE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatcccgcacgtcagcgcaccagccgagtcgcataatgaacaaaaaactgacc
ccgagcctagccatgaaaaaccaacaacaggcgctgtatcaggcactgagtgcgcgcgat
cgtaaattcgacggccgcttttttgtcggcgtttcttcgaccggtatttattgccgcccg
gtgtgcagtgcccgcacgccgaaaatcgagaactgtaccttttaccctagcgcggcggcg
gcggagctggccgggtttcgcccctgcctgaagtgccggccggagttggcgccggggctg
gcgttgattgatctgggcaatcgctatgcccaggtggcggtacagttgattgaacagggc
tatctgtcggagcatagctgtgagcaactggccgcgcggttgggcatttccgaccgccac
ctgcggcgtatctttgccgatcagtttggcgcgtcaccgattgattatgcccagtcgcac
cggctgttacaggccaaaaggctgctggcggataccgatatgccgctaagtgaggtggcg
tttgccgccggtttcggcagcctgcggcgtttcaacgagttgttcaaggcacgctaccgg
ctgatcccctcggcgctgcgcagcagcagcggccgtaatgaacgcaccgtcgccagcggg
ctggtatttcatctgggttaccgtccgccctatgattggccgcgtatgctgagttttttg
caaacccgtgcggtgagcggagtggaaaaggtggaggggcaacagtatctgcgggcgatc
gccatcacccagggcggcattgattatcacggctgggtcagcgtgcagccggaagaaagc
cacaatcgagtgcgggttgagattgcccccgccctcagccgggtgaccacggaagtgctg
cgtcgaatccggcagctgtttgatctggacgcggcgccagatctgatcgtccaggccttg
gggcagcttgccgccgatgcgccgggcctgcgtttgcccggctgcgtcaacggctttgaa
caggcgacccgggcggtgcttgggcagttggtcagcgtcaagatggcggcgacctttgcc
ggatgcatggctgaacgctggggaacgccgctggaacagccttacgccggcattactcat
gtgttccccaatgccgaacaggtggcgcggttgcaacccgaggaactgcgcccgctgggg
gtgcagctgaaacgcgcagcggcgctgatcgccatcgcacgggcggtcaccgaagggcgg
ctgcagttggaaaacgtgctggatattgagcaagggatcaaggcgctgaccgcgttgccg
gggattggcagttggacggcctgttacatcgcgatgcgcgcctggtcatggccggatgtg
tttctgacaggggattatctgatcaagcagcgctttcctgggatgacgccacgccagatt
gaaaactatgccgaatgctggcggccctggcgctcttatgccacgctgcatctgtggcat
aaccagggttgggtaccgtcaacggacactgacgagtag
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