Serratia proteamaculans: Spro_3679
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Entry
Spro_3679 CDS
T00595
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
spe
Serratia proteamaculans
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spe03009
]
Spro_3679
Enzymes [BR:
spe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Spro_3679
Ribosome biogenesis [BR:
spe03009
]
Prokaryotic type
rRNA helicases
Spro_3679
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
AAA_22
Ins_allergen_rp
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABV42775
UniProt:
A8GI35
LinkDB
All DBs
Position
4071880..4073205
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AA seq
441 aa
AA seq
DB search
MTVTNFSELELDERLINALRDKGYERPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RNQTLLFSATLEGDAIREFAERILKEPVEVEADPSRRERKKILQWYYRADDVVHKTALLV
HLLKQPDVQKSVIFVRKRERVHELAAWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVN
VLVATDVAARGLDILDITHVFNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKVGRYLNEPLKARVIEELRPSTKVPSEKSNGKPSKKVIAKRAADKEKNKEKAKVKVRHR
DAKNVGKRRQPKAKPESNGAK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaccaatttttccgagctcgaactcgatgaacgcctgataaacgccctgcgt
gataaaggctacgaacgcccaaccgccattcaagccgaggcgatcccgcctgcgatggat
gggcgcgacgtattgggttcggcgccgaccggcaccggcaagaccgctgcatttttgctg
ccggtattgcaacatctgctcgacttcccacgcaagaagtccggcccaccgcgcgtactg
atcctgaccccgacacgcgagctggcgatgcaggtagccgatcaggcacgtgaactggct
gctcatacttcgctggatatcgctaccatcaccggtggcgttgcctatatgaaccacgcg
gaagtcttcagcgaaaaccaggacgtggtcgttgccactaccggtcgtttgctgcagtac
attaaagaagaaaacttcgactgccgcgcggtagaaacgctgatccttgatgaagccgac
cgtatgctggacatgggcttcgcgcaggacatcgaaactatttccgccgaaacccgctgg
cggaaccagaccctgctgttctccgcgacgctggaaggtgatgccatccgcgagttcgcc
gaacgcattctgaaagagccggtagaagtcgaagctgacccgtcacgccgtgaacgcaaa
aagatcctgcagtggtactaccgcgccgacgacgtggtgcataaaaccgccctgctggtg
catttgctgaaacaaccggacgtgcagaaatccgtaatcttcgtgcgtaagcgtgagcgc
gtgcatgagctggcagcctggctgcgcgaggccggtatcaatacctgttacctcgaaggc
gaaatggtgcaggccaagcgtaacgaagcggtaaaacgcatgatggatggccgtgtcaac
gtactggtcgccaccgacgttgctgcccgtggcctggatatcctggatatcacccacgta
ttcaacttcgacatgccgcgcacggcggatacctacctgcaccgcatcggccgtaccggt
cgtgccgggcgtaaaggcaccgcgatctcgctggttgaggcacacgaccacctgctgttg
ggcaaagtaggccgttacctgaacgagccgctgaaagcgcgggtgatcgaagagctgcgt
ccgtcaaccaaagtaccgagcgaaaaaagcaacggcaagccttccaagaaggtgattgcc
aaacgcgcagccgacaaagaaaagaacaaagaaaaagccaaggtgaaagtacgtcatcgc
gatgcgaaaaacgtgggcaaacgtcgccagccgaaggccaaacctgagagcaacggcgcg
aagtaa
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