Serratia proteamaculans: Spro_3816
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Entry
Spro_3816 CDS
T00595
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
spe
Serratia proteamaculans
Pathway
spe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spro_3816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spe03400
]
Spro_3816
Enzymes [BR:
spe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Spro_3816
DNA repair and recombination proteins [BR:
spe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Spro_3816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Peptidase_M16_C
Motif
Other DBs
NCBI-ProteinID:
ABV42912
UniProt:
A8GIH2
LinkDB
All DBs
Position
complement(4222563..4225934)
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AA seq
1123 aa
AA seq
DB search
MFRVYHSNQLDLLKTLTSALIAREPLADPFQQEVVLVQSPGMAQWLQMQLAEQFGIAANI
AFPLPATFIWDMFTRVLPGIPKESAFSKDAMTWKLMWLLPDLLTQPEFAPLQHYLTDDGD
KRKIHQLAGRVADLFDQYLVYRPQWLESWQKGERIDGLAEAQQWQAPLWARLVEYTQELG
QPEWHRANLYRRFISALDKAETPPAGLPPRVFICGISALPPVYLEALQALGKHIDIHLMF
TNPCRYYWGDIQSQSFLAKLQSRKRQHYRDKTEYSLFRDPDNASALFNDAGEQDLPNPLL
ASWGKLGRDHHFLLSQIESSEEVFAFVDIPADNLLHGIQHDMLELKNSAVIGTTPETLES
SDTKRRLDPADRSISLHACHSPQREVEVLHDQLLSMLADDPELTPRDIIVMVADIDSYTP
YIQAVFGNASPERYLPFAISDRKASQAHPALQAFISLLDLPQSRFTSEQVLALLEVPALA
ARFSIREEGLRLLRHWVGESGVRWGLDDDNVRELDLPATGQHTWQFGITRMLLGYAMDSN
AGDWQGVLPYDESSGLVAELAGQLAELLAALSRWRQRLGQARSLPEWQPLCRQLLETFFE
QDGETEVVLALIEREWNRLFEFGLAARYPDDVPLSILRDELAARLDQERISQRFLAGQIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAQQVKRGDRSRRDDDRYLFLEAI
LSAQQRLYISFIGRSIQDNSERYPSVLVTELLEYLEQSYCLPGDEHLDADGSARLVGKHL
LNWHSRMPFAAENFLPDTEAQSYAAEWLPAADRRGAAHPPFNQPLLPDEKTQVSLDDLLR
FYRHPIRAFFQLRLGVSFILEETELPDEEPFTLDNLSRYQFNSQLLNTLIDGEDASRLFQ
RVRAAGGLPFGPFGEIYWQKQQEEMSELAEQVRAERSEGHSLELDIDIAGVRISGWLHQV
QGDGLLRWRPSTLSAVDGILLWLEHLVYCCVGGSGESRIYGRKGAVWRFAALSAQEAHEQ
LAELVAGYQRGLCQPLLLLNKSGWAWLSQCYQPQTQQIDWDEEVQIKARGKLLQTWQGDQ
RIPGEGEDPYVQRVFRQLDNIYLAQILDETERYLLPVARHNLG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtttagggtttatcattccaatcagttggatttgctgaaaacgttaaccagcgcgttg
atagccagagagccattggccgatccttttcaacaggaagtggtgctggtgcagagcccg
ggtatggcacagtggctgcagatgcaactggctgagcagttcggcattgctgccaacatc
gcttttccactgccggctaccttcatctgggacatgtttacccgggtgttaccgggtatc
ccgaaagagagcgccttcagcaaagacgccatgacctggaagctgatgtggctgctgccc
gatctgctcactcagcctgaatttgccccgctgcagcattacctcaccgacgacggcgac
aagcggaagattcaccagcttgccggccgggtcgccgacctgtttgaccaatatctggtg
tatcgcccgcaatggctggaaagctggcagaaaggcgaacgcattgacggactggcggaa
gcacagcagtggcaggcaccactgtgggcgcgactggtcgaatacacccaggaactgggg
cagccggaatggcatcgtgccaacctgtatcgccgttttatcagcgcgttagataaagct
gaaaccccacctgcggggttgccgccgcgggtatttatctgcggcatctcggccttgccg
ccggtctatctggaagcgctgcaggcgctgggtaagcatatcgatattcatctgatgttc
accaacccctgccgctactattggggggacattcagagccagtccttcctggcgaaatta
cagagccgcaaaagacagcattatcgcgataaaacggaatattcgttattcagggatcca
gataacgcctctgcattgtttaatgacgccggcgagcaagacttgccgaacccgctgttg
gcctcatggggcaagttggggcgcgaccaccattttttactttcgcagatcgagtcctca
gaagaggtttttgcctttgtggatatccctgcggacaatctgttgcatggcattcagcac
gatatgttggagctgaagaacagtgcggtgatcggcaccaccccggaaacgctggagagc
agcgacaccaaacgtcgactggatccggccgataggtctatcagcctgcacgcctgccat
agcccgcagcgtgaggtagaggtgctgcatgaccaactgttgagcatgctggcggacgat
cccgagctgacgccgcgtgacatcatcgtgatggtggcggatatcgacagttacacccca
tatattcaggcggtattcggtaacgcctcgcccgaacgctatctgccgtttgccatttct
gaccgaaaagccagccaggcgcacccggcgctacaggcgtttatctcgctgttggatctg
ccgcagagccgctttacctcagaacaggtactggctttgctggaagttccggcactggcg
gcgcgtttctccattcgggaggaaggattgcgcctgttgcgccattgggttggtgagtct
ggcgtgcgctgggggctggatgacgacaacgtgcgtgaattggatctgcccgctaccggc
cagcatacctggcaatttggcattacacgcatgttgctgggttacgcgatggacagcaat
gccggtgattggcagggcgttttgccttatgacgagtcgagcgggctggtggcagaactg
gccgggcaactggcggaactgctggcagcgctgagtcgttggcggcaacgtctggggcag
gcgcgctctttgccagagtggcagccactgtgtcgtcaactgcttgagaccttttttgag
caggacggcgaaacggaagtggtgttggcactgatagagcgggagtggaacaggctgttt
gagttcgggctggcggcgcgttatcccgatgatgtcccgctgtctatcctgcgggacgag
ttggcagcacgcctcgatcaggaacgcatcagccagcgtttcctggccgggcaaatcaac
ttctgtacgctgatgcccatgcgttctatcccattcaaagtggtttgcctgctgggtatg
aacgacggggtttatccgcgcactctgccgccgttaggctttgatctgatggcgcaacag
gtgaaacgcggtgaccgcagccgccgtgatgatgaccgttacctgttcctggaagcgatt
ttgtcggctcagcaacggctgtacatcagctttattggccgctccattcaggataacagc
gagcgttatccctcggtgttggtgactgaactgctggagtatctggagcaaagttattgt
ctgccgggcgatgaacatctggacgccgatggcagcgcacgtctggtgggtaaacacttg
cttaactggcattcacgcatgccgtttgccgccgagaacttcctgcccgataccgaagcg
cagagctatgcggcagaatggctgcctgccgccgatcggcgcggtgcggcacatccgccg
tttaatcagcccttgctgccggatgagaaaactcaggtctcgctggacgatttattacgc
ttctaccgccacccgatccgcgccttcttccaactgcggctgggggtcagtttcatcctg
gaagaaaccgaactgccggatgaagaacccttcaccctggataacctcagccgctatcag
ttcaacagccaactgctgaacaccctgattgacggcgaggatgccagccgcctgtttcag
cgggtgcgtgccgccggtgggttgccttttggccccttcggcgaaatttactggcaaaaa
caacaagaagagatgagcgaactggccgaacaggtacgcgccgaaagaagtgaagggcac
agcctggaactggatatcgacattgccggtgtgcgcatcagcggctggttacatcaggta
caaggcgatgggctgctgcgctggcggccatcaaccctatcggcagtcgatggcatattg
ctgtggctggagcatctggtgtattgctgcgtcggggggagcggcgaaagtcgcatttac
gggcgcaaaggggctgtctggcgctttgctgcattaagcgcgcaagaggcccacgaacaa
ttggccgaactggtggcgggttatcagcgcggcctgtgtcagccgttgctgctgctgaac
aaaagcggctgggcgtggctgagccagtgctatcagccacaaacgcagcagattgactgg
gatgaagaggtgcaaatcaaggcccggggcaagctgctgcaaacctggcagggcgaccag
cgtattccgggcgaaggtgaagacccttatgtgcagcgggtcttccgccagttggacaat
atttatttagcgcaaattctggacgaaacagaacgttatctgttgccggtggcacggcat
aaccttgggtaa
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