Serratia proteamaculans: Spro_4407
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Entry
Spro_4407 CDS
T00595
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
spe
Serratia proteamaculans
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spe03019
]
Spro_4407
03009 Ribosome biogenesis [BR:
spe03009
]
Spro_4407
Messenger RNA biogenesis [BR:
spe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Spro_4407
Ribosome biogenesis [BR:
spe03009
]
Prokaryotic type
rRNA processing factors
Spro_4407
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
ABV43501
UniProt:
A8GK61
LinkDB
All DBs
Position
complement(4880148..4881617)
Genome browser
AA seq
489 aa
AA seq
DB search
MTAELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGAAHVGVSQRIESEAERDRLKKAVAGYCDELGGFIIRTAAEGIGEE
ELSQDAAFLKRLWTKVMERKKRNQTKYKLYGELALAQRILRDFAGAALDRIRVDSRLTHD
LLVEFTGEYIPDITAKLELYTGSQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLDETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNDEHRRRV
LHSLELALSKDRVKTTINGFSQLGLVEMTRKRTRESIEHVLCHDCPTCHGRGTLKTVETV
CYEILREIVRVHHAYDSDRFLVYASAAVGEALKSEESHALAEVEIFVGKQVKVQIEPLYS
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagctactggttaatatcacaccgtctgaaacgcgggttgcctatattgat
ggcggcatcctgcaagagatccatatcgagcgcgaatccaagcgcggcattgtcggcaat
atttataaagggcgcgtaagtcgcgtgttgccgggtatgcaggcggcattcgtcgatatc
ggcctggacaaagcggccttcctgcacgcctccgatatcatgccgcacaccgaatgtgtc
gccggtgatgagcagaaaaatttccacgtgcgcgatattgccgagctggtgcgccagggg
caggatttgatggtgcaggtggtgaaagatccgctaggcaccaaaggcgcacgcctgacc
accgacatcaccctgccttcgcgttacctggtgttcatgccgggggcggcgcacgttggc
gtttcgcagcgtattgaaagtgaagccgagcgcgatcgcctgaaaaaagccgtcgccggt
tactgcgatgaactgggtggttttatcatccgcactgcggcggaaggcattggtgaagaa
gagctgtcgcaagacgccgccttcctcaagcgcctgtggaccaaggtgatggagcgtaaa
aaacgcaaccagaccaaatacaagttgtacggtgagctggcgctggcgcagcgtattttg
cgtgacttcgccggtgctgcactggacaggatccgcgtggactcgcgtctgacccacgat
ctgctggtggaatttaccggtgagtacatcccggatattaccgccaagctggagctgtac
accggcagtcagccgatcttcgatctgtatgatgttgaaaacgagatccagcgtgcgcta
gagcgtaaggttgagctgaagtccggcggctacctgatcatcgaccagactgaagcgatg
accaccgtggatatcaataccggcgcctttgtcggccatcgcaatctcgacgaaaccatc
ttcaataccaatatcgaagcgacccaggccattgcccgccaactgcggctgcgcaatctg
ggcggcattatcattatcgactttattgatatgaataatgacgaacatcgtcgtcgggtg
ctgcattcgctggagctggcgctgagtaaagatcgggtaaaaaccacgatcaacggcttc
tctcagctaggcttagttgaaatgacgcgtaaacgcacgcgtgaaagcattgaacatgtg
ctgtgccatgattgtcctacttgtcatggacgcggcaccctgaaaactgtggaaaccgtg
tgctacgaaattttgcgtgaaatagtgcgcgtgcaccatgcttatgattcagatcgtttc
ttggtttacgcctctgcggcggtgggtgaggcgctgaaaagcgaagagtcccatgcgctg
gccgaagtggaaatctttgttggcaaacaggtcaaggtgcagatcgaacccttgtacagc
caggaacaatttgacgttgtcatgatgtag
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