Serratia proteamaculans: Spro_4839
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Entry
Spro_4839 CDS
T00595
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spe
Serratia proteamaculans
Pathway
spe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Spro_4839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spe03400
]
Spro_4839
Enzymes [BR:
spe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Spro_4839
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Spro_4839
DNA repair and recombination proteins [BR:
spe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Spro_4839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
HscB_4_cys
RNHCP
Motif
Other DBs
NCBI-ProteinID:
ABV43932
UniProt:
A8GLE2
LinkDB
All DBs
Position
complement(5359460..5360269)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILALSDQPVLSVQRRAKYLL
IELASGWIIVHLGMSGSLRMLAEETEAGKHDHVDLVISNGMTLRYTDPRRFGAWLWCDDL
ATSNVLAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDNKLVVGVGNIYASESLFTAG
ILPDRPAGSLSKVEAEVLVATIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRACGTPIESAKHGQRSTFFCPRCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaaccagccgccgcggtattgaaccttacctggttggc
catagtattcaatatgcggtggtacgcaatgcacgcctgcgctggccggtctccgagcaa
attctggcgttgagcgaccagccggtactcagcgtacagcgtcgcgccaagtatttgctg
attgaactggctagcggctggattatcgtccatctggggatgtcaggcagtctgcggatg
ttggcggaggaaaccgaggctggaaagcacgaccacgtcgatctggtgatcagcaatggc
atgacgctccgttataccgatccgcgccgttttggtgcctggctatggtgtgacgatctg
gcgaccagcaatgtgctggctcaccttggaccggaacccttgagtgaagcctttaccggt
gcctacctgtacgaaaaatcacgcaacaagcggacgctgatcaaaccctggttgatggat
aacaagctggtggtgggcgtgggcaatatctacgccagtgaatcgttgtttaccgccggg
atcctgcctgaccggcctgcaggctcgctgagcaaggtagaagccgaagttttggtggca
accattaaggcggtattgctgcgttcgattgagcagggcggtaccacgctgcgtgatttc
ctgcagtcggacggcaagccgggttattttgcgcaggaactgcaggtgtatgggcgagcg
ggtgagccttgccgcgcgtgcggcacgccgatcgagtccgccaagcacgggcagcgcagc
actttcttctgcccacgctgccagcgctga
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