Serratia proteamaculans: Spro_4887
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Entry
Spro_4887 CDS
T00595
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spe
Serratia proteamaculans
Pathway
spe03030
DNA replication
spe03410
Base excision repair
spe03420
Nucleotide excision repair
spe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spro_4887
03410 Base excision repair
Spro_4887
03420 Nucleotide excision repair
Spro_4887
03440 Homologous recombination
Spro_4887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spe03032
]
Spro_4887
03400 DNA repair and recombination proteins [BR:
spe03400
]
Spro_4887
Enzymes [BR:
spe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spro_4887
DNA replication proteins [BR:
spe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Spro_4887
DNA repair and recombination proteins [BR:
spe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Spro_4887
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spro_4887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
ABV43979
UniProt:
A8GLI9
LinkDB
All DBs
Position
complement(5417070..5419874)
Genome browser
AA seq
934 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLLVTPGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTSNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQGLLQGLGGLDMLYANLDSIATLSFRGAKTMAAKLEQNK
EMAYLSYKLATIKTDVELDITCADLQVSPLDVDTLQQLFKQYEFKRWLADVEAGVWLEGK
KGAGVKATSAAKSSASAVAETGKAQAEATLSQEGYVTILDEDTFTEWLEKLKKAEVFAFD
TETDGLDTLTANLIGLSFAIAPGEAAYLPVAHDYLDAPTQLDRAHVLATLKPLLEDEKAL
KVGQNLKFDMSLLARYDITLRGIAFDTMLESYVLDSVGGRHDMDSLSDRYLGHKTVTFEE
IAGKGKKQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPQLKESAELLTVFNQIEMPLLP
VLSHIERTGVLIDQSILATHSIELTKRLAELEIQAHELAEEPFNLASTKQLQAILYEKQK
LPILKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPVSGRV
HTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPEGYRIVAADYSQIELRIMA
HLSQDEGLLKAFAAGEDIHRATAAEVFGLPLDKVTNEQRRSAKAINFGLIYGMSAFGLAR
QLGIPRGEAQRYMDLYFERYPGVLEYMERTRQQAASQGYVSTLDGRRLYLPDVSSSNGMR
RKAAERAAINAPMQGTAADIIKRAMIEVDAWLQAQEKPLVRMIMQVHDELVFEVHESVLE
ESNQRIRELMENSMALAVPLKVDVGVGANWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattgcagaaaacccactaatcctggttgacggttcctcttacctctaccgc
gcttatcacgccttccctccgctgaccaactccgcgggtgaaccgaccggggcaatgtac
ggcgtgctgaatatgctgcgtagcctattgctgcagtaccagccaagccatgttgcggtg
gtgtttgatgccaaaggaaaaaccttccgtgatgagctgttcgcagaatacaaatcacac
cggccacctatgccggacgatctgcgcgcgcaaatcgagccgttgcacaaaatggtcaag
gccatggggttgccgctgttggtcacgcccggcgtcgaagccgacgacgtcataggcacg
ctggcgctggaagctgaaaaggccggtcatgcggtgctgatcagcactggcgataaagac
atggcgcagttggtcacgtcgaacgtcaccttgatcaacaccatgaacaacaccattctc
ggcccgcaggaagtgtgcgacaaatacggtattccgccggagctgattatcgacttcctg
gcgctgatgggggatgcctcggataacatcccaggcgtaccaggcgtgggtgagaagacc
gcgcaggggctgttacagggcctgggtgggctggatatgctctatgcgaatctggacagt
atcgccacgctcagcttccgtggagccaagaccatggcggccaaactcgagcagaacaaa
gagatggcatacctctcttacaagctggccactatcaaaactgacgttgagctggatatt
acctgcgccgatctccaggtgtctccgctggacgtcgatacgttgcaacaattgttcaaa
cagtatgaatttaagcgctggctggcagatgtcgaagccggcgtttggctggaaggcaag
aaaggtgccggtgtgaaagcaaccagcgcggcgaaatcttctgccagtgcagtggcagaa
actggaaaagcccaggcagaagcaacgctatcgcaagagggttacgtcaccattctggat
gaagacaccttcactgagtggctggaaaaactgaaaaaagccgaagtgttcgcgtttgat
accgaaaccgacggcctggatactctgaccgctaacctgatcggtctgtcatttgccatt
gctccgggtgaagccgcttatctgccggtggcacatgactatcttgatgcgccaacgcag
ttggatcgagctcatgtcctggctacgctgaaaccgctgctggaagacgagaaagcgttg
aaggtcgggcaaaacctgaagtttgatatgagcctgctggcgcgttacgacattacgctg
cgcggtattgcctttgataccatgctggagtcctatgtgctggacagcgtgggcggccgt
cacgatatggacagcttgtccgatcgttaccttggtcataaaaccgtgaccttcgaagag
attgccggtaagggtaaaaagcagctcaccttcaaccagattgcactggagcaggcagca
ccttacgccgctgaagatgctgacgtgacgctgcaattacatttggcgatgtggccgcaa
ttgaaggaaagcgccgagctgttgacggttttcaatcagattgaaatgccgctgttgccg
gtgttgtcgcatatcgagcgaaccggggtgctgattgatcaaagcattttggccacccat
tccatcgaattgaccaagcgcctggctgagttggaaattcaggcccatgagctggcggaa
gagcctttcaacctggcgtcgaccaaacagttgcaggcgatcctgtacgaaaaacaaaag
ttgccaatactgaagaaaactccgggcggtgcaccttcgactaatgaagaagtgctggcc
gagttggcgctggattacccattaccgaaggtaattctggaataccgtggcctggcgaag
ctgaaaaccacctataccgacaagctgccgctgatgattaacccggtgagtggtcgggtg
catacctcctatcaccaggcggtgacggctaccgggcgtctctcttccagcgatcccaac
ctgcagaatattccggtgcgtaacgacgaagggcgccgtatccgtcaggcatttattgcc
cctgaaggctaccgcattgttgctgccgactattcacaaattgaactgcgtattatggct
cacctgtcacaggatgaggggttgctgaaagcctttgcggctggtgaggatattcaccgc
gccacggcggctgaggtgtttggcctgccgctcgataaggtgaccaacgagcagcgccgc
agcgccaaggcgattaacttcggcctgatttatggcatgagcgcatttggtctggcgcgt
cagttagggatcccacgcggtgaagcgcagcgttacatggatctttacttcgaacgttat
ccgggcgtgctggagtatatggagcgcacccgtcagcaggccgccagccagggctacgtc
agcacgctggatggccgccgtctgtatctgccggatgtcagctccagcaacggtatgcgt
cgcaaggcggccgagcgagcggcgattaatgccccaatgcaggggacggcagccgacatc
atcaaacgtgcgatgatcgaagtggacgcctggctgcaagctcaggaaaagccactggta
cgtatgattatgcaggtacacgatgaactggtgttcgaggtacatgagtcggtgcttgag
gaatccaaccagcgtattcgtgagctgatggaaaacagtatggcgctggccgtgccgctg
aaagtcgacgttggcgtgggtgccaattgggatgaagcgcactga
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