Sphingopyxis sp. EG6: SPYCW_0051
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Entry
SPYCW_0051 CDS
T10392
Name
(GenBank) HhH-GPD
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPYCW_0051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
speg03400
]
SPYCW_0051
Enzymes [BR:
speg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
SPYCW_0051
DNA repair and recombination proteins [BR:
speg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPYCW_0051
Prokaryotic type
SPYCW_0051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
BBB07035
LinkDB
All DBs
Position
46906..47925
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AA seq
339 aa
AA seq
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MSVSFPARILDWYDRAARVLPWRIAPGSDIVPDPYRIWLAEVMLQQTTVAAVAGYFQRFT
ARWPTVADLAAADDADVMAAWAGLGYYARARNLLACARAVVRDHGGRFPDGEAALRALPG
IGDYTAASVAAIAFGRAAVVVDANIERVIARHRLIETPLPMAKREIRAALAPIVPADRPG
DFAQALMDLGATICTPRAPACAACPLMADCRARGRADVERLPVKPPKKAKAHRHGLAHWI
ERDARVWLVRRPGKGMLGGMRALPGGDWTDTRPIESAVAEVDHGFTHFDLTLKLVRRDAL
PENGDAAAEGEWWPISDLDAAGLPTLYRKLIDKMLERDA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgagctttcctgctcgcatcctagactggtacgaccgcgccgcgcgcgtgctg
ccgtggcggatcgcgccgggcagcgacattgtccccgatccctatcgcatctggctggcc
gaggtcatgctgcagcagacgacggtcgccgcggttgcgggctattttcagcgtttcacc
gcccgctggccgacggtcgccgacttggcggcggcggacgatgccgacgtcatggccgct
tgggcggggctcggctattatgcccgcgcgcgcaacctgctcgcctgcgcacgcgccgtc
gtgcgcgatcatggcgggcgttttcccgacggcgaggcggccttgcgtgcgctgccgggg
attggcgattataccgcggcatcggtcgcggcgatcgcctttggccgtgcggcagtcgtg
gtcgatgccaatatcgaacgcgtgatcgcgcgccaccgcctgatcgaaaccccgctgccc
atggcgaagcgcgagattcgcgccgcgctggcgccgatcgttcccgccgaccgcccgggc
gatttcgcgcaggcgctgatggacctgggtgcgaccatttgtacgccgcgagctcctgcc
tgcgcggcctgtccgctgatggcggattgccgcgcgcgcgggcgcgccgacgtcgaaagg
ctgcccgtcaagccgcccaaaaaggccaaggcgcatcgtcacggactggcgcactggatc
gaacgcgacgcgcgggtctggctcgtccgccgtccgggcaaagggatgcttggcgggatg
cgcgcgctgcccggcggtgactggaccgatacgcgtccgatcgagtcggcggtggccgaa
gtcgatcatggtttcacccatttcgacctgacactgaaactggtgcggcgtgacgcgctt
cccgaaaacggcgatgccgcagcggaaggcgaatggtggccgatctctgaccttgacgcg
gcggggctgccgacgctctatcgcaagctgatcgacaagatgctggagagagacgcatga
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