Sphingopyxis sp. EG6: SPYCW_0057
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Entry
SPYCW_0057 CDS
T10392
Symbol
rtcR
Name
(GenBank) sigma-54 interacting protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
speg Sphingopyxis sp. EG6
Brite
Transcription factors [BR:
speg03000
]
Prokaryotic type
Other transcription factors
Others
SPYCW_0057 (rtcR)
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NCBI-ProteinID:
BBB07041
UniProt:
A0A2Z5U8G8
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Position
complement(53484..55103)
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AA seq
539 aa
AA seq
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MYKNDMKPLTVLGFLGSTLDAGKFDAGRWNKWRPSVSICMQEDLRVDRFILLHGSHHRRL
AEIVAKDIADVSPETEVVPQTVDFDDAWDFEEVYGKLLDFARSFPFDPDAEDYLIHITTG
THVAQICLFLLTEARYLPGRLLQTQPQRGAPQPVGIWNSIDLDLSRYDSIATRFAEASAE
SASFLKSGIETRNPAFNRMIEEIEQVAVRSRAPILLMGPTGAGKSQLARKVYELKKLRHQ
LGGPFVEVNCATLKGDSATSALFGHRKGAFTGAAQDRPGLLKSADKGLLFLDEIGELGLD
EQAMILRAIEEGQFLPVGSDSETRSDFQLIAGTNRDLVEQVRKGGFRNDLFARLNLWTFS
LPGLAERREDIAPNLDYELERFAEREGSRVTFNKEARQRYLAFAESHDAKWQGNFRDLAA
SVTRMATLNTTGRIDVGAVDLEIKRLGSTWHADISEADIFDLILSRDQLAEIDPFDRVQL
AFVVKTCRACRSLSEAGRQLFAASRELRTSTNDADRLRKYLARFNLTWTDLQQPVGGYR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtataagaatgacatgaagccgctgaccgttcttggatttctgggttcgaccctcgac
gcgggcaagttcgacgccggacgctggaacaagtggcggccgagcgtgagcatctgcatg
caggaggatctgcgcgtcgatcgcttcatcctgctccacggcagccatcaccgccggctg
gccgagatcgtggcaaaggacatcgccgacgtatcgcccgagaccgaggtcgtcccgcaa
acggtcgacttcgacgacgcatgggatttcgaggaggtttacggcaagctgctcgacttc
gcgcgcagctttcccttcgatcccgacgcggaagattatctgatccacatcacgacgggc
acgcacgtcgcgcaaatctgtctcttcctgctcaccgaggcgcgctacctgcccggccgg
ctgctgcagacgcagccacagcgcggcgcaccgcaaccggtgggcatctggaacagcatc
gatctcgacctctcgcgctacgacagtatcgcgacgcgcttcgccgaggccagcgcggag
agcgcgagctttctgaaaagcgggatcgaaacgcgcaaccccgccttcaaccgcatgatc
gaggagatcgaacaggtagcagtccgtagccgtgcgccgatcttgctcatgggaccgacc
ggtgcgggtaagagtcagctggcgcggaaggtctatgaactcaagaagcttcgtcaccag
ctcggcggcccgttcgtcgaggtcaactgcgcgacgctgaagggcgacagcgcgacctcg
gcgctgttcggccatcgcaagggcgcctttaccggcgctgcgcaggaccgtcccgggctg
ctcaagagcgccgacaagggcttactgttcctcgacgagatcggcgagctcgggctcgac
gaacaggcgatgatcctgcgcgcgatcgaggaagggcaatttctgccggtcggatcggac
agcgagacgcgaagcgatttccagctgatcgcgggcaccaaccgcgatcttgtcgaacag
gtgcgcaaaggcggctttcgcaacgacctgttcgcgaggctgaacctctggaccttttcg
cttcccggcctcgccgaacgccgcgaagacatcgcacccaatctggattacgagctcgaa
cgcttcgccgagcgcgaagggtcgcgggtcaccttcaacaaggaagcgcgccaacgatat
cttgccttcgcggagagccacgacgcgaagtggcagggaaattttcgcgatctcgccgcc
agcgtcacgcgaatggcgacgctcaacacgaccgggcggatcgacgtcggcgccgtcgat
cttgagatcaagcgcctgggctctacttggcacgccgacatatccgaagctgatattttc
gacctgattctaagtagagaccagctggccgagattgatccatttgaccgggtgcaactg
gccttcgtcgtcaaaacctgtcgtgcatgccgatcgctgtcggaggcagggcggcaactg
ttcgcggcgtctcgcgagttgcgtacaagcacgaatgacgcggatcgccttcgcaagtat
ctggctcgctttaatctgacgtggaccgatcttcagcaaccggtcggcgggtaccgatag
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