Sphingopyxis sp. EG6: SPYCW_0109
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Entry
SPYCW_0109 CDS
T10392
Symbol
hisS
Name
(GenBank) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPYCW_0109 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
speg01007
]
SPYCW_0109 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
speg03016
]
SPYCW_0109 (hisS)
Enzymes [BR:
speg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SPYCW_0109 (hisS)
Amino acid related enzymes [BR:
speg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SPYCW_0109 (hisS)
Transfer RNA biogenesis [BR:
speg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SPYCW_0109 (hisS)
Prokaryotic type
SPYCW_0109 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BBB07093
UniProt:
A0A2Z5U815
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All DBs
Position
116746..118044
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AA seq
432 aa
AA seq
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MSKDKSAKIPTPQPVRGTQDMLGDFADRFAHVVETFERVRRLYGYKRIEVPVIEPTAVFA
RSLGETTDVVSKEMYSFEDRGGESITLRPEFTAGIARAYITNGWQQYAPLKVATHGPLFR
YERPQKGRYRQFHQLDAEVLGSDSPLSDAELLVFADQLLKELGISEGVTLTLNTLGDAAS
RDAWRAALVEHFESHRGALSEDSLARLDKNPLRILDSKDPKDRPIADSAPDIDAFLTSEA
QDFFGAVTAGLDAAGVAWERNARLVRGLDYYRHTAFEFVTDRLGAQGTVLGGGRYDGLIE
ALGGPPTAAVGWAAGIERLAMLLEEYSSDEVIAVIADNPSRLEEARRIEQHLRSAGQPVL
SVFKGNSKKQAEKAKAQGVGALLYVREDERPNRRLHLTEVTRKGDEGTSRLLEILGKLPS
EYSELEGDDDKK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggacaaatccgccaagatcccgaccccgcagccggtgcgcggcacgcaggac
atgctgggcgatttcgccgaccgtttcgcgcatgtggtcgagacgttcgaacgggtgcgg
cggctgtatggctacaagcggatcgaggtgccggtgatcgaaccgaccgcggtattcgcg
cgctcgctgggcgagacaaccgacgtggtgtctaaagaaatgtattcgttcgaggatcgc
ggcggcgagtcgatcacgctgcgccccgaattcaccgcggggatcgcgcgggcctatatc
accaacggatggcagcaatatgcaccgctgaaggtcgcgacccatggcccgctatttcgt
tacgagcgcccgcagaaggggcgttatcgccagtttcaccagctggatgccgaagtgctg
ggcagcgatagtccgctctccgatgccgagctgctggtgttcgcggatcagctgctcaag
gaattggggatcagtgagggcgtgaccttgacactcaacacgctgggcgatgcggcgagc
cgcgatgcgtggcgcgcggcgctggtcgagcatttcgaaagccatcgcggcgcgctgtcg
gaggacagtctagcgcggctcgacaagaacccgctgcgcattttggacagcaaggatccg
aaggaccggcccattgccgacagcgcacccgacatcgacgcgtttctgacgagcgaagcg
caggatttctttggcgcggtgaccgcgggactggatgcggcgggcgtcgcgtgggaacgc
aatgcgcggctggtgcgcgggctcgattattatcgccacaccgcgttcgaattcgtcacc
gaccggctgggcgcgcagggcacggtgctgggcggcgggcgttacgacgggttgatcgag
gcgctcggcggcccgccgaccgcggcggttggttgggcggcggggatcgagcggttggcg
atgttgctcgaagaatactctagcgatgaagtgattgccgttatcgcggacaatccgagc
cgccttgaggaagcgcgtagaattgaacagcatcttcgttcggctggccaaccggtgctt
tcggtcttcaagggaaacagcaagaagcaggctgaaaaggccaaggcgcaaggcgtcggt
gcactcctttacgttcgcgaggatgagaggcccaatcgccgtctccacctcacggaagtg
acgcgaaagggtgatgaagggacgagccgattgctggagatactggggaagctgccgtca
gaatattcggaactggaaggtgacgacgacaagaagtag
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