Sphingopyxis sp. EG6: SPYCW_0228
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Entry
SPYCW_0228 CDS
T10392
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
speg02000
]
SPYCW_0228
Transporters [BR:
speg02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCW_0228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BBB07212
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All DBs
Position
249758..251881
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AA seq
707 aa
AA seq
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MTRRLTAAAFTGIAHIALITPVMAQDAASTTESSDSDIVVTASRQGSQSLIDTPLAIQAF
SGEQLEERGIRETTDLVNSIPGASPGEQVGSVIKTFSLRGVGAAGGIGDSPIGYYIDDVP
FAIPNSPIAPPLRFIDIDRIEVLRGPQGTLYGQGSAGGTIIYHTREPDLDNFEMRGEATI
AKMDDASALNYGVSAAISVPLIKDRLAIRISGGYDKRAGYVDIFSETPATGGPSFKNAND
VTNRDVRAVLLWQPTDALRIRAQAAHWEPRQNYTQSINQLEPAQQWFSGTTRGYENGNFD
LYSVSVEYDAGAAILSSSTSYLDAEYGYLTGQTFGPLGTGALFNGYDARSFAQEIQLRSN
GDGPFHWLVGGFYQNAKALFSFDANLTALTISGFNDTRTRNYSAFGEISYDLFGGKLVPL
VGIRYYKDNRRFDADSILTGTGSGQTKPDKVTWRANLSWFPTDDLTAFVTVSTGFRSGIT
QTPFQASLVEASGIPSSIALAPDTLTNYEAGIKAKLADGRVQLGLNVYRIDFKDLQFGLT
PFGVSAFANVGKARTTGVDLEARWRTPIDGLNLGAVANWNDSEFRDIYPAVTASLPNVAN
GERLSSTAKYNYRLDADFERPLGSGDLRFFLNGAASRTSSRVMYDGYVVRPYSLYNASAG
IRTDRWELSIFGENLADERGPSFVRNSLLLAGPYPRTIGLRLRTTID
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacacgccgcctgaccgccgccgcctttaccggcattgcacatatcgcattgatcact
ccggtgatggcgcaagatgcagcttccacgacggaaagcagtgacagcgacatcgtcgtg
acggcgtcgcgccagggctcgcagtcgctgatcgacacgccgctcgcgatccaggccttc
agcggcgagcagctcgaagagcgcggaatccgcgagacgaccgatcttgtgaactcgatc
ccgggtgcttcgccgggcgaacaggtcggctcggtgatcaagaccttctcgctgcgcggc
gtgggagccgcgggcggcatcggcgactcgccgatcggctactatatcgacgacgttccc
ttcgcgattcccaattcgccgatcgcgccgccgctccgcttcatcgatatcgaccgcatc
gaggtcctgcgcgggccgcagggtacactctatgggcagggttcggcagggggcacgatc
atctaccatacgcgcgagcccgatctcgacaatttcgagatgcgcggcgaggcgacgatc
gcgaagatggatgatgcgagcgcgctgaactacggggtgtcggcagcgatctcggtgccg
ctgatcaaggatcggctcgcgatccgcatcagcggcggctatgacaagcgtgccggctat
gtcgatatcttcagcgagacgccggcgaccggtgggccgtcgttcaagaatgccaacgac
gtcaccaaccgcgacgtgcgggcggtcctgctctggcagccgaccgacgcgctgcgcatc
cgggcgcaggccgcgcactgggaaccgcgccagaattatacgcagagcatcaaccagctt
gagcctgcccagcagtggttcagcggaaccacgcgcggatatgagaacgggaatttcgat
ctctacagcgtgtcggtcgaatatgacgccggcgccgcgatcctcagcagttcgaccagc
tatctcgatgccgaatatggctatctgaccggacagaccttcggaccgctcggcaccggc
gcgctcttcaacggttatgatgcgcgcagcttcgcgcaggaaatccagcttcgctcgaac
ggcgatggtccgttccactggctggtcggcggtttctaccagaatgctaaggcgctcttc
agcttcgatgccaacttgaccgcgctcaccatcagtgggttcaacgatacgcggacccgc
aactattccgctttcggcgaaatcagctacgatctgttcggcggcaagctcgtgccgctg
gtcggcatccgctattacaaggacaatcgacgcttcgatgcggactcgatcctgaccgga
acgggctcggggcaaaccaaacccgacaaggtgacgtggcgcgcgaacctttcctggttc
ccgaccgacgatctgaccgccttcgtgacggtcagcacgggattccggagcggcattacc
cagacgccgttccaggcctcgctggtcgaggcctcgggaattccgtcctcgatcgcgctc
gctcccgatacgctcaccaactatgaggcgggcatcaaggcgaagctcgccgacggccgc
gtccagctcgggctcaacgtctaccgcatcgacttcaaggatctgcaattcggtctcacg
ccgttcggcgtttccgcgttcgcgaacgtcggcaaagcccgcacgacgggggtcgatctc
gaagcgcggtggcgcaccccgatcgatggcctcaatctcggcgcggtcgccaactggaac
gacagcgaattccgcgacatctatcccgccgtcaccgcctcgcttcccaacgtcgccaat
ggcgagcgcctctcgagcacagcgaagtataattatcgtctcgatgccgatttcgagcgg
ccgctcggcagcggcgacctgcgcttcttcctcaacggtgcggccagccgcaccagcagc
cgggtcatgtacgacggctatgtcgtccggccctactcgctctacaatgccagtgcggga
atccgcacggaccgctgggaactttcgatcttcggcgagaatctcgccgacgaacgcggt
ccgtctttcgttcgcaacagtctgctgctcgccggaccttatccgcgcaccatcggcctg
cgcttgcgcaccaccatcgattga
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