Sphingopyxis sp. EG6: SPYCW_0309
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Entry
SPYCW_0309 CDS
T10392
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
speg02000
]
SPYCW_0309
Transporters [BR:
speg02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCW_0309
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BBB07293
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All DBs
Position
341821..343830
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AA seq
669 aa
AA seq
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MTKTAYRAAPLLALVLSLVPAAAQAAEAEADPTIIVTAPELTNEAEARVQKTAGGADVVS
HQDYADKSIVSLRDTLAFSPGVYLQPRYGQEVRISIRGSGLSRGFHMRGLTLLQDGVPIN
LADDNGDFQELEPIFFDHLEVYRGANALRFGSGTLGGAVNGVTPTGRTAEGFYLRGDVGS
FDSYRGLVSAGVAGDRVDAWGAVSADTSSGDRDHVNRRSFRFHGNVGLKLSDVVSTRFYA
SYNDIKQEIPGALTFDQALTTPRVASAAAVAGDQARDIVSLRLQNRTTFDWGAFKLDVGG
FVNAKSLYHPIFQVIDQDSLDLGGFFRADYASGPVEVTLGGELRRGSTDARQFVNIAGRR
GALVFDADQTARTANIYGEVRVRPVEQLTLIAGGVYADGFRKRRVNVSTSRDGRIDFDAF
SPKFGVLFEPSEDVQFFANYSRSAEFPGFGEVFQTIGTPPVSQVVSTIRPQRAWTAEIGT
RGKAGIVRWDLALYRSTLKGELLQFTTNVSIPAATFNADRTLHQGVEAALEIAPTDWLRL
RQVYTYSDFRFRGDSQFGNNCLPVVPKHVYRAEARIGSDALHIAPNVEWVPDGPFADYRN
LVQTPGYALLGVTGGARIAEGIDAFVDVRNITGKKAIGDISAAITVTPASAVYYPVERRA
VSAGIRARF
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaactgcctatagggcggcgcctttgctcgcgctcgtcctctcgctcgtccct
gccgcggctcaggccgccgaggccgaagccgatccgacgatcatcgttaccgcccccgaa
ctgaccaatgaagccgaagcccgtgtccagaagaccgcgggcggcgccgacgttgtcagc
catcaggattatgccgacaagtcgatcgtgtcgctgcgcgacacgctggccttttcaccc
ggcgtgtatctccagccgcgttacgggcaggaggtgcgcatttcgatccgcggatcggga
ctttcgcgcggtttccacatgcgcggcctgacgctgctgcaggacggggtgccgatcaac
cttgccgatgacaatggcgatttccaggagctcgagccgatctttttcgaccatctggag
gtctatcgcggcgcgaacgcgttgcgcttcgggtcgggaaccttgggcggcgcggtcaat
ggcgtgacaccgaccgggcgaaccgctgaaggcttctacctgcgcggcgatgtcggcagt
ttcgacagctatcgcgggctggtgtcggcgggcgtggcaggcgatcgcgtcgatgcgtgg
ggcgcggtcagcgccgatacatcgagcggcgaccgcgaccatgtcaaccggcgcagcttc
cgcttccacggcaatgtcgggctgaagctcagcgacgtcgtgtcgacgcgcttctatgcc
agctataatgacatcaagcaggaaatcccgggtgcgttgacctttgaccaggcgctgacc
acgccgcgcgtcgcgagcgcggcggcggtggcgggcgatcaggcgcgcgacatcgtgtcg
ctgcggctgcagaaccgcacgacgttcgactggggcgcgttcaagcttgatgttggcggc
ttcgtcaatgctaagtcgctctatcacccgatctttcaggtgatcgatcaggactcgctc
gacctcggcggcttcttccgcgccgactatgcgagtgggcctgtcgaggtgacgctgggc
ggcgagctgcggcgcggcagcaccgacgcacgacagttcgtcaatatcgccgggcggcgc
ggcgcgctggtgttcgatgccgaccagaccgcgcgcaccgccaacatctatggcgaggtg
cgagtgcggccggtggagcagctgaccttgattgcgggcggcgtctatgccgacggcttc
cgcaagcggcgcgtcaatgtctcaacgtcgcgtgacgggcggatcgatttcgacgccttt
tcgcccaagttcggcgtgctgttcgaaccgagcgaagatgtacaattcttcgccaactac
agccgctcggccgaatttccgggctttggcgaagtgttccagacgatcggtaccccgccg
gtcagccaggtcgtttcgacgatccgcccgcagcgggcgtggacggccgagatcgggacg
cgcggcaaggccgggatcgtccgctgggatctggcgctctaccgctcgacgctgaagggc
gaattgctgcaattcacgaccaatgtcagcatccctgcggcgaccttcaacgccgaccgg
acgctgcaccaaggggtcgaagcggcgttggaaattgcgccgaccgactggctgcggctg
cggcaggtctatacctacagcgacttccgcttccggggtgacagccagtttggcaacaac
tgcctgccggtggtgcccaagcatgtctaccgcgccgaagcgcggatcggcagcgacgcg
ctgcatatcgcgccgaatgtcgagtgggtgcccgatgggccgttcgccgattaccgcaac
ctcgtccagacacccggctatgccctgctgggcgtgaccggcggggcgcggatcgccgaa
gggatcgacgcgttcgtcgatgtccgcaacatcaccggcaagaaagcgatcggcgatatt
agcgcggcgatcaccgtgaccccggcatcggcggtctattatccggtcgagcgccgcgcg
gtgtccgccggtattcgcgcgcgcttttaa
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