Sphingopyxis sp. EG6: SPYCW_0359
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Entry
SPYCW_0359 CDS
T10392
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPYCW_0359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
speg03019
]
SPYCW_0359
Enzymes [BR:
speg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SPYCW_0359
Messenger RNA biogenesis [BR:
speg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SPYCW_0359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
BBB07343
UniProt:
A0A2Z5U8Q4
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All DBs
Position
380848..382056
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AA seq
402 aa
AA seq
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MSVLPEADWRGRPGLRRIVAALTDAGGSVRIVGGAVRDTLLGLPVTDVDLATPLVPEEVT
RRLEAADIKVIPTGIAHGTVTAIASGDHHEITTLRRDVETDGRRATVAFAEDWRDDAARR
DFTINALYADPDTGAVDDYFGGVDDLRAGCVRFIGDAATRIAEDHLRILRFYRFAARFGR
GELDADSHAAVIEARQSLKSLSRERIADELTKILALPDPRAIVGQMAADGIFAVMLPELD
RDFAATLDRLIANEVEAGVPVAAHRRLAALLSADPGAAEQVASRLRLSTRQRKYLAAIAG
HRGDTARPVRQLAYRIGIEAARDVHLIAGDAARARDLAGWEVPVLPIRGGDIVARGIAAG
PEVARILKAVEAAWVAEDFPGSARIAELVAELVDQKIARTSD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgcttcccgaggccgattggcgcgggcgaccggggttgcgccggatcgttgcg
gcgctgaccgacgctggcggatcggtccggatcgtcggcggcgcggtgcgcgacacgctg
ctggggctgccggtcaccgatgtcgacctcgcgaccccgctcgtcccagaggaggtgacg
cggcggctggaggcggccgacatcaaggtgatcccgacgggtatcgcgcatggcaccgtg
accgcgatcgccagcggcgaccatcacgaaatcaccacgctgcgccgcgacgtcgaaacc
gacgggcgccgcgcaacggtcgccttcgccgaggattggcgcgacgatgcggcgcggcgc
gatttcacgatcaacgcgctttatgccgatcccgataccggggcggtcgatgactatttc
ggcggggtcgacgatcttcgcgctggctgcgtgcggttcatcggcgatgcggcgacgcgg
attgccgaagatcatctgcgcatcctgcgcttctatcgctttgcggcgcgtttcgggcgg
ggcgaactggatgcggacagccatgccgcggtcatcgaagcacgccagtcgctcaagagc
ctgtcgcgcgagcgcatcgccgacgaactgaccaagatattggcgctgcccgacccgcgc
gccattgtcgggcagatggcggccgacggcatttttgcggtgatgctgcccgaactcgat
cgcgatttcgcggccacgcttgaccggttgatcgccaatgaagtggaggcgggcgtaccc
gtcgcggcgcatcgtcggcttgcggcgctgttgtccgccgacccgggcgccgccgaacag
gtcgcgagccgcctgcggctgtcgacgcggcaacgcaaatatctggccgcgattgcggga
catcgcggcgataccgcgcgtccggtgcgccagctcgcgtaccgcatcggtatcgaggcc
gcccgcgatgtccatctgattgctggagacgctgcgcgcgcgcgcgatctggcaggctgg
gaagtaccggtgctgccgatccggggcggcgacatcgtcgcgcgcgggatcgcggccggg
ccagaagtggcgcgaatcctgaaggcggtcgaggcagcgtgggtggcggaggattttccg
ggttcggccagaatcgccgagctcgtcgccgagcttgtcgatcagaagatcgcgcgaacc
agcgactga
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