Sphingopyxis sp. EG6: SPYCW_0709
Help
Entry
SPYCW_0709 CDS
T10392
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg03030
DNA replication
speg03410
Base excision repair
speg03420
Nucleotide excision repair
speg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPYCW_0709
03410 Base excision repair
SPYCW_0709
03420 Nucleotide excision repair
SPYCW_0709
03440 Homologous recombination
SPYCW_0709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
speg03032
]
SPYCW_0709
03400 DNA repair and recombination proteins [BR:
speg03400
]
SPYCW_0709
Enzymes [BR:
speg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPYCW_0709
DNA replication proteins [BR:
speg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SPYCW_0709
DNA repair and recombination proteins [BR:
speg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SPYCW_0709
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPYCW_0709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
DprA_N
Ribosomal_L20
HHH_5
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BBB07693
UniProt:
A0A2Z5U9R4
LinkDB
All DBs
Position
complement(730866..733679)
Genome browser
AA seq
937 aa
AA seq
DB search
MSEKNHLYLVDGSSYIFRAYHRLPPLTNPHGVPVGAVYGYTTMLWKLAKDLHDADGPTHL
AVILDHSSQSFRNEIYDQYKANRPEPPEDLRPQFPLIRDATRAFSLPCIEMEGFEADDLI
ASYAEAAVREGWDVTIVSSDKDLMQLIREPADGPHVDMLDTMKNVRLGLDAVNEKFGVTP
DLVGDVLALMGDSVDNVPGVRGVGPKTATKLIQEYGSLTAALDGAETMKASKLRDNLIEH
RAMAELSRVLVDLKRDCPLPDALDDLKLGAIPPLPLKAFLDEHGFRSLSAKLDLGATPGG
PPTLPRAAAVPAPAASGTPSTPTLPAMPPIDRAAYETVTTLDALDRWIADARAAHVVAID
TETASLDSVTGRLVGVSLAIAPGKACYIPLGHGGTDMFAEKPEQIAMGDALARLGDLFAD
DAVLKVGHNLKYDIGVLAQHGVTIAPYDDTLVMSFALDAGKHQHGLDELAKLHLDHACLS
FKDVCGTGKSQISFAEVQLDRATEYAAEDADVALRLWKLLKLRLPIEGGTRVYEMVDRPL
AAVIEGMERAGIMVDRDYLAKLSGEFATEMLRIEGEIHELAGQPFAIGSPKQLGEILFDK
LGLKGGRKGKSGDWSTDQNELERLERDGVPIARKILEWRQLSKLKSTYTDALQQQINATT
GRVHTSYSLVGAQTGRLSSTDPNLQNIPIRTETGRQIRDAFIAAPGHVLIATDYSQIELR
LAAHMADVPELREAFAQGQDIHAATAIELFGESNRDTRGKAKTVNFSILYGISRWGLAGR
LEITPDEAQALIARYFERFPGISDYITDTLDKARTTGYTETLFGRKTWFPRIKAASQNER
AGSERAAINAPIQGTSADLIKRAMARMPAALADAGLSDVKMLLQVHDELVFEAPADKAEA
AGAVIRTVMMGAAEPALTLSVPLDVEIGIGKSWGEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaagaatcatctctatctggtcgatggctccagctacatcttccgcgcctat
caccgcctgccgccactgaccaacccgcacggagtgccggtcggcgcggtctatggctat
acgacgatgctgtggaaactggccaaggacctgcatgacgccgacgggccgacgcacctc
gcggtcattctcgaccactccagccagtcgttccgcaacgaaatttacgaccagtataag
gccaaccgccccgaaccgcccgaggatctgcgcccgcaattccccctgatccgcgacgcg
acgcgcgccttttcgctgccgtgtatcgagatggagggtttcgaggccgacgatctgatc
gcctcctatgccgaagccgcggtgcgcgaaggctgggacgtcaccatcgtttcgtcggac
aaggatctgatgcagcttatccgcgagcctgctgacgggccgcacgtcgacatgctcgac
acgatgaagaatgtccgccttggcctcgacgcggtgaacgagaagtttggcgtcaccccc
gacctggtcggcgacgtgctcgcgctgatgggcgacagcgtcgataacgtccccggggtg
cggggcgtcgggccgaagaccgcgaccaagctgatccaggaatatggcagtctcaccgct
gcactcgacggcgccgagacgatgaaggccagcaagctgcgcgacaatctgatcgaacat
cgcgcgatggccgaattgtcgcgcgtgctggtcgatctgaagcgcgactgcccgctgccc
gatgcgctggacgacctcaagctcggcgccattccgccgctgccgctcaaggcgtttctc
gacgagcatggcttccgctcgctgtcggccaagctcgaccttggcgcgacgccgggcggc
ccgccgaccctgccgcgcgctgccgccgtgcctgcgcctgctgcgagcggcacgccatcg
acgccgaccctgcccgcgatgccgcccatcgaccgcgcggcctatgaaaccgtgacgacg
ctcgacgcgctcgaccgttggatcgccgacgcccgcgccgcacatgtcgttgcaatcgac
accgaaacggccagtctcgacagcgttaccgggcggctcgtcggggtcagcctcgcgatc
gcgcccggcaaggcgtgctatatcccgctcggtcatggcggcaccgacatgttcgccgaa
aagcccgagcagatcgcgatgggtgacgcactcgcgcggctcggcgacctgttcgctgac
gatgcggtgctaaaagtcgggcataaccttaaatatgacatcggcgtgctcgcgcagcat
ggcgtcaccattgcgccctatgacgacacgctggtgatgagcttcgcgctcgacgcgggc
aagcatcagcatgggctcgacgaacttgccaagctccacctcgaccatgcctgcctgtca
ttcaaggatgtatgcggcaccggcaaatcgcagatcagctttgccgaggtgcagctcgac
cgcgcgaccgaatatgccgccgaggatgccgatgtggcactgcgcctgtggaagctgctc
aagctgcggctgccgatcgagggcgggacgcgcgtttacgaaatggtcgaccgcccgctg
gcggcagtgatcgagggcatggagcgcgccgggatcatggtcgaccgcgactatctggcg
aagctgtcgggcgagtttgccaccgaaatgctgcgcatcgagggcgagattcacgaactc
gcgggccagccctttgcgatcggcagccccaagcagctcggcgaaatcctctttgacaaa
ctcggtttgaagggcgggcgcaagggcaagtcgggcgactggtcgaccgaccagaacgaa
ctcgaacggctcgaacgcgacggcgtgccgatcgcgcgcaagatcctcgaatggcgccag
ctgtccaaactgaaatcgacctataccgacgcgctgcaacaacagatcaatgcgacaacc
ggccgcgtccacaccagttacagtctcgtcggcgcgcagaccggacgcctctcatcgacc
gatccgaacctccagaatatcccgatccgtaccgaaaccgggcgccagatccgcgacgcc
tttatcgccgcgccgggccacgtcctgatcgccacagactacagccagatcgagctgcgc
ctcgccgcgcatatggccgatgtccccgaactgagggaggcctttgcgcaggggcaggac
attcacgcggcgaccgcgatcgaattattcggcgaaagcaaccgtgacacgcgcggcaag
gccaagacggtcaacttctcaatcctctacggcatttcgcgctggggactggcggggcgg
ctcgagatcactcccgacgaagcgcaggcgctgatcgcgcgctatttcgaacgcttcccc
ggcatttcggattatatcaccgacacgctagataaggcgcggacgacggggtacaccgag
acgctgttcgggcgcaaaacctggttcccgcgcatcaaggcggcgagccagaacgaacgc
gcgggcagcgaacgcgccgcgatcaacgcgccaatccaagggaccagcgccgacctcatc
aaacgcgcaatggcccgcatgcccgcggcgctcgccgacgcggggctgtccgacgtcaag
atgctgctccaggtccacgacgaactggtgttcgaagcgcccgcggacaaggcggaggcc
gcaggtgcggtcatccgtacggtgatgatgggcgccgccgaacccgcgctgacgctatcg
gtgccgctcgacgttgaaatcggtatcggcaaaagctggggcgaagcgcattga
DBGET
integrated database retrieval system
