Sphingopyxis sp. EG6: SPYCW_0815
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Entry
SPYCW_0815 CDS
T10392
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg00061
Fatty acid biosynthesis
speg00071
Fatty acid degradation
speg01100
Metabolic pathways
speg01212
Fatty acid metabolism
speg02024
Quorum sensing
speg04146
Peroxisome
Module
speg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SPYCW_0815
00071 Fatty acid degradation
SPYCW_0815
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPYCW_0815
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPYCW_0815
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
speg01004
]
SPYCW_0815
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
speg04147
]
SPYCW_0815
Enzymes [BR:
speg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SPYCW_0815
Lipid biosynthesis proteins [BR:
speg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SPYCW_0815
Exosome [BR:
speg04147
]
Exosomal proteins
Exosomal proteins of breast milk
SPYCW_0815
Exosomal proteins of breast cancer cells
SPYCW_0815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BBB07799
UniProt:
A0A2Z5U9L3
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All DBs
Position
839626..841431
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AA seq
601 aa
AA seq
DB search
MKLDNPHLDHFPSLVAMFFDRAARGGEDPFLWRKADRVWHPLSWRQVANQVAALAHNLRE
MGLKDGDRVVLVSENRPEWCIADLGIMAAGCITVPTYTTNTERDHQHILDNSGATAVIVS
TAKLARTLMPAVTRSDAHIVITMESLRVGQQGDVAIHEWEPLVTGGEAWLDGAKARAAAM
TREDTACLIYTSGTGGAPRGVMQHHGAILHNAAGAAEVLVNDFGIGDEEVFLSFLPLSHA
YEHSGGQFLPIMVGAQIYYSEGLEKLVSNIEETRPTIMVVVPRLFEVIRARMIKSVEKQG
KLANWMLNQALRVGEKDYERRMGLLDRPVDLLLDKLFRPKIGQRFGGRMKALVSGGAPLN
PEIGVFFHSIGLTLLQGYGQTEAGPVISCNRPSAGVKMDTVGPPLMNTEVKIADDGEILV
RGELVMKGYWRNDAETARVLVDGWLHTGDIGHIDEKGRIVITDRKKDLIVNDKGDNVSPQ
RVEGMLTLQPEILQAMVYGDKRPHLVGLLVPDPEWMAEWAEAEGLPKDLCRLREHEKFRA
SLRAAVDRVNGQLSVIEKVRKFDFADEPFTIENEQMTPSMKIRRHVLREVYADKIAALYK
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggacaacccccatctcgaccattttccaagcctggtcgcgatgttcttcgac
cgcgccgcgcgcggcggcgaagatccgttcctgtggcgcaaggcggaccgcgtctggcat
ccgctgagctggcggcaggtcgccaaccaggttgcggcgctggcgcataatctgcgcgaa
atggggttgaaggacggcgaccgcgtcgtgctggttagcgaaaaccgccccgaatggtgc
attgccgatctcggcatcatggccgccggttgcatcaccgtgccgacctacacgaccaat
accgaacgcgaccaccagcacatcctcgacaacagcggtgcgaccgcggtgatcgtgtcg
accgcgaaactggcccgcacgttgatgcccgcggtcacgcgctccgacgcgcatatcgtc
atcaccatggaaagcctgcgcgtcgggcagcagggcgatgtcgcgatccacgaatgggag
ccgctggtgaccggcggcgaagcctggctggacggagccaaggcgcgcgccgccgcgatg
acgcgcgaggatactgcgtgcctgatctacaccagcggcacgggcggcgcgccacgcggg
gtgatgcagcatcatggcgcgatcctgcacaatgccgcgggcgcggctgaagtgctggtc
aatgatttcggcatcggcgacgaggaagtgttcctgtcgttcctgccgcttagccacgcc
tatgaacattcgggcgggcagttcctgccgatcatggtcggcgcgcagatttattacagc
gaaggcctggaaaaactggtttcgaacatcgaggagacgcgcccgacgatcatggtcgtc
gtgccgcgcctgttcgaagtgatccgcgcgcggatgatcaaatcggtcgaaaagcagggc
aagctggcgaactggatgctgaaccaggcgctgcgcgtcggcgagaaggattatgagcgc
cgcatggggctgctcgaccgcccggtcgacctgctgctcgacaaattgttccggcccaag
atcggccagcgcttcggcggacgcatgaaagcattggtttcgggcggcgcgccgctcaat
cccgaaatcggcgtgttttttcactcgatcgggctgaccttgctccagggctatggccag
accgaggcggggccggtgatcagctgcaaccgcccgagcgcgggggtcaagatggacacc
gtcggcccgccgctgatgaacaccgaggtcaagatcgccgatgatggcgagatattggtg
cgcggcgagctggtgatgaaaggctattggcgcaatgacgccgagaccgcgcgggtcttg
gttgatggctggctccacaccggcgacatcggccatatcgacgaaaagggccgcatcgtc
atcaccgatcgcaagaaggatctgatcgtcaacgacaagggcgacaatgtctcgccccag
cgcgtcgaagggatgttaaccctccagcccgagattttgcaggcgatggtctatggcgac
aaacgcccacaccttgtcggcttgctggtacccgatcccgaatggatggccgaatgggcg
gaggccgaagggctaccgaaagacctgtgccgtctgcgcgagcatgaaaaattccgcgcc
tcgctgcgcgccgccgtggaccgcgtcaacggccagctgtcggtgatcgaaaaggtgcgc
aaattcgacttcgccgacgagccgttcacgattgaaaatgaacagatgaccccgtcgatg
aagatccgccgccacgtgctgcgcgaggtctatgccgacaagatcgcggcactttacaag
gcttaa
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