Sphingopyxis sp. EG6: SPYCW_0937
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Entry
SPYCW_0937 CDS
T10392
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
speg02000
]
SPYCW_0937
Transporters [BR:
speg02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCW_0937
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
BBB07921
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Position
complement(962416..964974)
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AA seq
852 aa
AA seq
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MRNTSRIPSLALAAALIASGSIAAPAVAQDGASDASDSATIIVTGTRRTDRTIADSTVPI
DVISSEMLQNSGTTETNRLLNQLVPSFNFPQPSLTDGTDSLRPATLRGLAPDQVLVLVNG
KRRHLSSLLNLNGSVGRGSSGVDMNTIPPLAIDRIEVLRDGAASQYGSDAIAGVINIQLK
RREGGRAQISYGKYVTTMEDVAQVASVAPTTTANGDPVITFTGRDRKRRDGDTYTFTTNI
GLPVGEGGYFNITAEYKDRAPTNRSGPDIRRNYAGIGDPRETTFNRYAHRFGDGESKDMN
FFFNAGMDVGPGFELYSFGSYGVRDANGAGFYRRALDVRNADWANGGQPFYPDGFLPLIT
SEIRDIAIAGGVRGETAGWNLDLSINYGTNRLNYGVENSFNTSLGGLNSPRKFNAGGLRS
GQMSVNFDAARSIDFGMGDTTLALGGEWRNENYKIVPGEVSSYIAGPFTFTNGAAPGSQV
FPGFSPTTAIDASRDSFAGYLELDADISDIFNVQVAGRYEHFSDFGDTVNGKLAARLEPV
SGLALRGSISTGFRAPGMAQQFFSTTSTNNVAGVGLIEIGTFPVGSPIAVALGAQPLDPE
KSVNIGGGIAFNMISGFSLTVDYYRIKIKDRITLTENLQGADVVAILQAAGVAGTSARFF
VNGIDTRTQGLDIVGSYRLPDFGAGRFTLTAGYNINDTKITDRRTFSGFTAQRLFARPES
FRLTDGQPSNKFNAGIDWEAGPAGMTLRANRYGKVFLPGPSLDITIPKDAAPGDVTLSPK
WIVDLEFRFRPVQPVQLAVGANNLLDEYPDRLPFGTVNGFNFGLNNSFLPYSSQSPFGFS
GRFVYGRLTVDF
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacacttcccgaatcccgtcgctcgcgcttgccgcagcgctgatcgccagcggc
agcatcgccgctcccgctgtcgcccaggatggcgccagcgacgcgtcggacagcgccacc
atcattgtgaccggcacccgtcgcaccgaccggacgattgccgacagcacggtgccgatc
gacgtgatttcgagcgaaatgctgcaaaacagcggcaccaccgaaacgaaccgactgctc
aaccagctcgtaccctccttcaacttcccgcagccgtcgctgaccgacggcaccgactcg
ttgcgccctgccacgctgcgcggccttgcacccgaccaggtgctagttctggtcaatggt
aagcgtcgccatctctcgtcgctgctcaacctcaacggctcggtcggacgcggttcgtcg
ggcgtcgacatgaacaccattccgccgctcgcgatcgaccggatcgaggtgctgcgcgac
ggcgccgcctcgcaatatggatcggatgccatcgcgggggtcatcaacatccagctcaag
cgccgcgaaggcggccgcgcgcagatcagctacggcaaatatgtcacgacgatggaggac
gtcgctcaggtggccagcgtcgcgccgacaacgacggccaacggcgatccggtgatcacc
ttcaccggccgcgatcgcaaacgccgcgacggcgacacctatacctttacgacgaacatc
ggcctgccggttggcgagggcggctatttcaacatcaccgccgaatataaggacagggca
ccgaccaaccgctccggccccgatattcgccgcaactacgccggcatcggcgatccccgc
gagaccaccttcaaccgctatgcccaccgcttcggcgacggcgaatcaaaggatatgaac
ttctttttcaacgccggcatggatgtcggccccgggtttgagctttacagtttcggcagc
tacggcgtgcgcgacgcaaatggtgccggcttctatcgccgcgcgctcgacgtgcggaac
gccgactgggcaaatggcggccagcctttctatcccgacggcttcctgccgctcatcacc
agcgaaatccgtgacatcgcgatcgccggcggggtgcgcggcgaaacggccggctggaat
ctcgacctttcgatcaattatggcaccaaccgtctgaactacggggtcgaaaacagcttc
aacacatcgctcggcggcctcaacagccccaggaaattcaacgcgggcggattgcgctcg
ggccagatgtcggtgaatttcgacgccgcgcgctcgatcgacttcggcatgggcgacacg
accttggcgctgggcggcgaatggcgaaacgaaaactacaagatcgtacccggtgaagtg
tcgagctatattgccgggcctttcaccttcaccaacggcgcggcgccgggatcgcaggtg
tttcccggtttctcgcccaccaccgcgatcgatgcctcgcgcgacagcttcgccggctat
ctcgagctggatgccgacatcagcgacatcttcaacgtccaggttgcaggtcgctacgaa
catttctccgattttggcgacacggtgaacggcaagctcgcggcgcgacttgaaccggtc
agcggccttgccctgcgcggttcgatatccaccggctttcgtgcgccgggtatggcccaa
caattcttctcgacgacctcaaccaacaatgtcgcgggggtcgggctgatcgaaatcggt
accttcccggtcggatcgccaatcgcggttgcgctaggcgcccagccgctcgatcccgaa
aaatcggtcaatatcggtggcggcatcgcgttcaatatgatttccggtttcagcctgacg
gtcgattactaccggatcaagatcaaggaccgcatcaccctgaccgaaaatctgcagggc
gccgacgtcgtcgccatcctgcaagcggcgggcgtggccggaacctcggcgcgcttcttc
gtgaacggcatcgatacgcggacgcaagggctcgacatcgtcggcagctatcgcctaccc
gacttcggtgcgggccgcttcaccctgaccgcgggttacaacatcaatgatacaaaaatt
accgaccgccggaccttcagcggcttcaccgcgcagcgcctgttcgcccggcccgaaagc
tttcgtctgaccgacggacagccgtcgaacaagttcaacgccggtatcgactgggaagcg
ggcccggccggcatgacgctgcgcgccaaccgttacggcaaggtgttcctgcccggaccc
agcctcgacatcaccattcccaaggacgccgcgccgggcgacgtgaccctgtcgccgaaa
tggattgtcgatctggaattccgcttccgtccggtgcagccggtgcaattggcggtcggg
gcgaacaatctgctcgacgaatatcccgaccgcctgccttttggtaccgtgaacggcttc
aacttcggcctgaacaacagcttcctgccttattcgtcgcagtcgcccttcggcttcagc
ggtcgctttgtgtacggtcgcctgacggtcgatttctaa
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