Sphingopyxis sp. EG6: SPYCW_1008
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Entry
SPYCW_1008 CDS
T10392
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg00970
Aminoacyl-tRNA biosynthesis
speg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPYCW_1008 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
speg03029
]
SPYCW_1008 (gatB)
Enzymes [BR:
speg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
SPYCW_1008 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
SPYCW_1008 (gatB)
Mitochondrial biogenesis [BR:
speg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SPYCW_1008 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DUF7224
Motif
Other DBs
NCBI-ProteinID:
BBB07992
LinkDB
All DBs
Position
1026952..1028418
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AA seq
488 aa
AA seq
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MSDYRIKGETGEWEVVIGLEVHAQITSNAKLFSGAATAFGAEPNTQVSLVDAAMPGMLPV
PNRECIRQAVRTGMAIEAQINRWSRFDRKNYFYADLPQGYQISQLYHPLVGEGSLTIAAD
EKAGIPADKVIGIERIHVEQDAGKLMHDQHPTMSYVDLNRSGVALMEIVSRPDMRSPAEA
GAYVRKLRSILRYVGSCDGNMEEGSMRADVNVSVRKPGDEFGTRTETKNVNSVRFVMAVI
EGEAKRQVELIESGGTVVQETRLYDPDRNETRSMRSKEDAHDYRYFPDPDLLPLELDDAF
LDECRASLPELPDAKRARYLSEGISAYNADVLTAEVEAARWFDALLEAGAKPVAAANWVT
SELFGALNRLGRDISDSPVSPAQAAELLGLVADGTISGTIAKQVFEKMLETGDGAAAIVN
REGLKQTSDTGAIEAEIAKVLAANADKVEQYKGGKEALFGFFVGQTMKAMQGKANPQVVN
ELLKKALG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatcgcatcaagggcgaaaccggcgagtgggaggtcgtgatcggccttgag
gtccacgcgcagatcacctccaacgccaagctgttctcgggcgccgcgacggcgttcgga
gccgagccgaacacgcaggtgtcgctggtcgacgccgcgatgccggggatgctgccggtg
ccgaaccgcgagtgcatccgccaggcggtgcgcaccggcatggcgatcgaggcgcagatc
aatcgctggtcgcggttcgaccgcaagaattatttctacgccgacctgccgcagggatac
cagatttcgcagctttatcatccgcttgtcggcgaaggttcgctgacgatcgccgccgat
gaaaaagcggggattccggccgacaaggtgatcgggatcgagcgtatccatgtcgagcag
gacgccggcaagctgatgcacgaccagcatccgacgatgtcgtacgtcgacctcaaccgc
tcgggcgtcgcgctgatggagatcgtctcgcgccccgacatgcgctcgcccgccgaagcc
ggcgcctatgtgcgcaagctgcgctcgatcctgcgctatgtcggctcgtgcgacggcaat
atggaagaaggctcgatgcgcgccgacgtcaacgtgtcggtccgcaagcccggcgacgag
ttcgggacgcgcaccgagacgaagaatgtcaattcggtgcgcttcgtgatggcggtgatc
gagggcgaggcgaagcgccaggtcgagctgatcgaaagcggcggcacggtggtgcaggaa
acgcggctttacgatcccgaccgcaatgagacgcgctcgatgcggtcgaaggaagatgcg
catgattaccgctatttccccgatcccgatttgttgccgctcgaactcgacgatgcgttt
ctcgacgaatgccgcgcgagcctgcccgaactgccggacgccaagcgcgcgcgttacctg
agcgaaggcatttcggcgtataacgccgatgtgctgaccgccgaggtcgaggcggcgcgc
tggttcgacgcgctgctcgaagcgggcgcgaagccggtcgcggcagcgaactgggtgacg
agcgagctgttcggcgcgctcaaccgcctcggccgcgacatttcggattcgccggtatcg
cccgcgcaggcggccgaactgctcgggcttgtcgccgatggcacgatttcggggaccatc
gccaagcaggtgttcgaaaagatgctcgaaaccggcgacggcgccgcggcgatcgtcaat
cgcgaggggctgaagcagacgagcgacaccggcgcgatcgaagccgagatcgccaaggtg
ctcgccgcgaacgccgacaaggtcgagcaatataagggcggcaaggaagccttgttcggt
ttcttcgtcggccagacgatgaaggcgatgcagggcaaggcgaatccgcaggtggtcaac
gagctgctcaaaaaggcgctcggctga
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