Sphingopyxis sp. EG6: SPYCW_1025
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Entry
SPYCW_1025 CDS
T10392
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
speg Sphingopyxis sp. EG6
Pathway
speg03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SPYCW_1025 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
speg03011
]
SPYCW_1025 (rpsA)
Ribosome [BR:
speg03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SPYCW_1025 (rpsA)
Bacteria
SPYCW_1025 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
CvfB_2nd
SH3_16
CsrA
Motif
Other DBs
NCBI-ProteinID:
BBB08009
UniProt:
A0A2Z5UA30
LinkDB
All DBs
Position
complement(1045224..1046936)
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AA seq
570 aa
AA seq
DB search
MATTAFPTRDDFAAMLNESLGGADGGFEGRVVKGTVTAIENDLAVIDIGLKSEGRVPLRE
FAMPGQKADINVGDEVEVYVDRVENANGETMLSRDRARREAAWDRLEEEFNKEARVEGVI
FGRVKGGFTVDLGGAVAFLPGSQVDIRPVRDVGPLMDLPQPFQILKMDRRRGNIVVSRRA
ILEETRAEQRSGLILNLEEGQIIEGAVKNITDYGAFVDLGGIDGLLHVTDMSYKRVNHPS
EVINIGDTVKVQIIRINRDTQRISLGMKQLESDPWEGVAAKYPVGAKLSGTVTNITDYGA
FVELEAGIEGLVHVSEMSWVKKNVHPGKIVSTSQEVDVIVLEVDSDKRRISLGLKQAQSN
PWGAFADTHPVGSVVEGEVKNATEFGLFVGLPGDVDGMVHMSDIAWGISGEEALHLHRKG
EQVQVVVLDVDVEKERISLGIKQLEKGAPAVGGGAAAAGSVKKNDVVTVTVLEVRDNGLE
VQAGDDGATGFIKRADLGRDRDEQRAERYQVGQKFDAMVIGFDRSKKPNFSVKAMQIAEE
KQAVEQYGSSDSGASLGDILGEALKAGKKD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggccactacggctttcccgacgcgcgacgatttcgccgcgatgctcaatgaatcgctt
ggtggtgctgatggcggctttgaaggccgcgtcgtcaagggcaccgtcaccgcgatcgaa
aacgacctggcagtcatcgacatcggtttgaagagcgaaggccgcgtgccgctgcgcgaa
ttcgccatgccgggccagaaggccgacatcaacgtcggcgacgaagtcgaagtctatgtc
gaccgcgtcgaaaacgccaatggcgaaaccatgctgtcgcgcgaccgcgctcgccgcgaa
gccgcgtgggaccgcctggaagaagaattcaacaaggaagcccgcgtcgaaggcgtcatc
tttggccgcgtcaagggcggcttcaccgtcgacctcggcggcgccgtggcgttcctgccc
ggcagccaagtcgacatccgccccgtgcgcgacgtcggcccgctcatggacctgccgcag
ccgttccagatcctcaagatggatcgccgccgcggcaacatcgtcgtgtcgcgccgcgcc
atcctcgaagaaacgcgcgccgaacagcgttcgggtctgatcctgaacctggaagaaggc
cagatcatcgaaggcgcggtcaagaacatcaccgattatggtgcgttcgtcgacctcggc
ggcatcgacggcctgctccatgtcaccgacatgagctacaagcgcgtcaaccacccgagc
gaagtcatcaacatcggtgacacggtcaaggtgcagatcatccgcatcaaccgcgacacc
cagcgcatcagcctgggcatgaagcagctcgaaagcgatccgtgggaaggcgtcgccgcc
aagtaccccgtcggtgcgaagctgtcgggtaccgtcacgaacatcaccgattacggtgcg
ttcgtcgaactcgaagccggcatcgaaggcctggtccacgtcagcgaaatgtcgtgggtc
aagaagaacgtccaccccggcaagatcgtttcgacgagccaggaagtcgacgtcatcgtc
ctcgaagtcgacagcgacaagcgccgcatctcgctgggcctgaagcaggcgcagtcgaac
ccctggggcgcattcgccgacacccacccggtcgggtcggtcgtcgaaggcgaagtcaag
aatgcgaccgaattcggcctgttcgtcggtctgccgggcgacgtcgacggcatggttcac
atgtcggacatcgcatggggcatctcgggcgaagaagcgctgcacctccaccgcaagggc
gagcaggttcaggtcgtcgttctcgacgtcgacgtcgagaaggaacgcatcagcctgggc
atcaagcagcttgaaaagggcgctccggccgttggcggtggcgcagccgctgccggttcg
gtgaagaagaacgacgtcgtcaccgtcaccgtcctcgaagtccgcgacaacggcctggaa
gtgcaggccggcgacgatggcgccaccggcttcatcaagcgcgccgaccttggccgcgac
cgcgacgaacagcgcgccgagcgttaccaggtcggccagaagttcgatgcgatggttatc
ggcttcgaccgttcgaaaaagccgaacttctcggtcaaggcgatgcagatcgccgaagag
aagcaggcggtcgaacaatatggttcgtcggactcgggcgcctcgctcggcgacatcctc
ggcgaagcattgaaagccggcaagaaagattaa
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