Sphingopyxis sp. EG6: SPYCW_1141
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Entry
SPYCW_1141 CDS
T10392
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg00260
Glycine, serine and threonine metabolism
speg00460
Cyanoamino acid metabolism
speg00630
Glyoxylate and dicarboxylate metabolism
speg00670
One carbon pool by folate
speg00680
Methane metabolism
speg01100
Metabolic pathways
speg01110
Biosynthesis of secondary metabolites
speg01120
Microbial metabolism in diverse environments
speg01200
Carbon metabolism
speg01230
Biosynthesis of amino acids
speg01240
Biosynthesis of cofactors
speg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPYCW_1141 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SPYCW_1141 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPYCW_1141 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SPYCW_1141 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SPYCW_1141 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SPYCW_1141 (glyA)
Enzymes [BR:
speg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SPYCW_1141 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BBB08125
UniProt:
A0A2Z5UAN5
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Position
complement(1152822..1154129)
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AA seq
435 aa
AA seq
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MTTNTLDKPIKSAGYFTDGVGTVDPAVAAAMKHELEREQYQIELIASENIVSKAVLEAQG
SVFTNKYAEGYPGRRYYQGCAPSDEVETLAIDRAKQLFDCGYVNVQPHSGAQANGAVMLA
LTKPGATILGMSLDAGGHLTHGAPPAMSGKWFNAVQYGVRADDHLVDFDQVEALAKEHRP
ALIIAGGSAYPRTLDFARFRKIADDVGALLMVDMAHFAGLVAGGVHPSPLPHAHVVTTTT
HKTLRGPRGGMILTNDEAIAKRINSAVFPGLQGGPLMHVIAAKAVAFGEALRPDFKDYAK
ATVANAQALAGRLKARGADIVAGGTDTHLALIDLRPLGVTGRDADEALERSAITCNKNGI
PFDPLPPIKTSGIRVGSPAGTTRGFGIAEFEEIGDMVADVLEALRDKGEHGDADVEANVR
GRVRALCERFPIYQG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaacacgctcgacaagcccatcaaatcggccggctatttcaccgacggcgtc
ggcaccgtcgatcccgccgtcgccgcggcgatgaagcatgaactggaacgcgaacaatat
cagatcgaactgatcgctagcgaaaacatcgtgtcgaaagcggtgctcgaggcgcaggga
tcggtcttcaccaacaaatatgccgagggttatcccggccgtcgctattatcagggctgc
gcgccgtcggacgaggtcgaaacgctcgccatcgaccgcgccaagcagctgttcgattgc
ggttatgtcaatgtccagccgcattcgggggcgcaggcgaacggcgcggtgatgctggcg
ctgaccaagcccggcgcgacgatcctcggcatgagcctcgacgccggcggtcacctgacc
cacggcgcaccgcccgcgatgtcgggaaaatggttcaacgccgtgcaatatggcgtgcgc
gccgacgaccatctcgttgatttcgatcaggtcgaagcgctggcgaaagaacatcgtccg
gcgctgatcatcgcaggtggctcggcctatccccgcactctcgactttgcccgcttccgc
aagatcgccgatgacgtcggcgcgttgctgatggtcgatatggcgcatttcgccggactc
gtagcgggcggcgttcatccttcaccgctgccgcacgcgcatgtcgtcaccacgacgaca
cacaagacgctgcgcggcccgcgcggtggtatgatcctgaccaatgacgaagcgatcgcc
aagcggatcaattcggcggtgttccccggcctgcagggcggcccgctgatgcatgtcatc
gctgccaaggcggtggcgttcggcgaagcgctgcgccccgatttcaaggattatgcgaag
gccaccgtcgccaatgcgcaggcactcgccggtcgactcaaggcgcgcggcgccgatatc
gtagcgggcggcaccgacacgcatctcgcgctgatcgacctgcgtccgctcggcgtcacc
ggccgcgacgccgacgaggcgctcgaacgcagcgcgatcacctgcaacaagaacggcatt
ccctttgacccgctgccgccgatcaagaccagcggcatccgcgtcggatcgcccgcgggc
acgacgcgcggcttcggcatcgccgagttcgaggaaatcggcgacatggtcgccgacgtg
ctcgaagcactgcgcgacaagggcgagcatggcgatgccgatgtcgaagccaatgtgcgc
ggccgcgttcgcgccctgtgcgaacgctttcccatctatcagggctga
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