Sphingopyxis sp. EG6: SPYCW_1186
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Entry
SPYCW_1186 CDS
T10392
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
speg Sphingopyxis sp. EG6
Pathway
speg03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
speg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPYCW_1186 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SPYCW_1186 (uvrA)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BBB08170
UniProt:
A0A2Z5UC04
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Position
complement(1195622..1198522)
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AA seq
966 aa
AA seq
DB search
MSLTHIKVRGAREHNLKGVDVDLPRDALIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGIP
YSPETGEPISAQTVSQMVDRVMELPEGTRAYLLAPVVRGRKGEYKKELAQWQKDGFTRVR
IDGEFYEIGDAPALDKKYKHDIEVVVDRIAVREGLGTRLADSFETALKLAEGLAYVDLAD
GPVPGREEEDTGGAMKGAGIPANRLIFSEKFACPVSGFTIAEIEPRLFSFNAPQGACPAC
DGLGERQEFDPDLVVPNHALSLKKGAIVPWAKSNPPSPYYMQVLESLGKAYGFDLTTPWQ
DLPGEVQLIILYGSGGKPVELTFKDGRRSYTTHKAFEGVIGNLNRRLLQTESAWMRKELS
KYQTPQPCETCHGARLRPEPLAVKIAGEDISMSAQRSVADALHWFSALDEKLNDTQKQIA
KAILKEINERLGFLNNVGLDYLNLNRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPS
IGLHQRDNDRLLATLKRLRDLGNTVIVVEHDEDAIRHADYVVDMGPGAGVHGGEIVAEGT
LKQVLANKKSLTAAYLTGAKKIEVPKHRRPGNGFDLVLKGARANNLNNVTAKIPLGTFTC
VTGLSGSGKSSLIIDTLYASAARVLNGARMVAGPHDSLKGLEHCDKVIDIDQSPIGRTPR
SNPATYTGAFTVIRDWFAGLPEAQARGYKPGRFSFNVKGGRCETCTGDGLIKIEMHFLPD
VYVTCETCHGKRYNRETLEVKFKGMSIADVLDMTVEDAAEFFKAVPAIRDKMAMLVRVGL
GYIKVGQQATTLSGGEAQRVKLAKELSRRSTGQTLYILDEPTTGLHFEDVRKLLEVLQQL
VDQGNSVIVIEHNLDVIKTADYILDLGPEGGVKGGEIVAAGTPEQVVKEPRSFTGQYLKP
LLAAGK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcacccacatcaaagtgcgcggtgcgcgcgagcataatctgaagggcgtcgac
gtcgacctgccgcgtgatgcgttgatcgtcatcaccggcctgtcgggcagcggcaaatcg
tcgctggcgttcgacaccatctatgccgaggggcagcggcgctatgtcgagagcctgtcg
gcctatgcgcgccagtttctggagatgatgcagaagcccgatgtcgagcatatcgacggc
ttgtcgcccgcgatcagcatcgaacagaagacgacgagccgcaacccgcgctcgaccgtc
gcaacggtcaccgaaatctacgactatatgcgcctgctctgggcgcgcgtcggcatcccc
tattcgcccgaaaccggcgagccgatcagcgcgcagacggtcagccagatggtcgaccgc
gtgatggaattgcccgagggcacgcgcgcctatctgctcgcccccgtcgtccgcggccgc
aagggcgagtataagaaggagctcgcgcagtggcagaaggacggcttcacgcgcgtccgc
atcgacggcgaattttacgagatcggcgacgcccccgcgctcgacaagaagtacaagcat
gacatcgaggtcgtcgtcgatcgcatcgcggtgcgcgaagggctgggcacacgccttgcc
gacagtttcgagaccgcgctgaagctcgccgaggggctcgcctatgtcgacctcgccgac
gggccggtgccggggcgcgaggaggaagacaccggcggcgcgatgaagggcgcgggcatt
ccggcgaaccggctgatcttcagtgagaaattcgcctgcccggtcagcggcttcacgatc
gccgagatcgaaccgcggctgttcagcttcaacgcgccgcaaggcgcctgccccgcgtgc
gatggcctcggcgagcggcaggagttcgaccccgatctcgtcgtccccaaccatgcgctg
agcctgaaaaagggtgcgatcgtgccgtgggcgaaatcgaacccgccctcgccttattat
atgcaggtgctcgaaagcctgggcaaagcctatggcttcgacctgacgacgccgtggcag
gacctgcccggcgaggtgcagctgatcatcctctatggcagcggcggcaagccggtcgag
ctgaccttcaaggacggacgccgcagctatacgacgcataaggcgttcgagggcgtcatc
ggaaatctcaaccgccgcctgctccagaccgagagcgcgtggatgcgcaaggagctgagc
aaatatcagaccccgcagccgtgcgagacgtgccatggcgcgcggctgcgccccgaaccg
ctggcggtgaagattgcgggcgaggacatcagcatgtcggcgcagcggtcggtcgcggac
gcgctccattggttcagcgcgctcgacgagaagctgaacgacacgcagaagcagatcgcc
aaggcgatcctgaaagagatcaacgagcggctcggcttcctcaacaatgtcgggctcgat
tacctcaacctcaaccgcacgtcggggacgctctcgggcggtgaaagccagcgcatccgc
ctcgcctcgcagatcggcagcgggctgtcgggcgtactctacgtcctcgacgagccgagc
atcggcctgcaccagcgcgacaacgaccggctgctcgcaacactcaaacgactccgcgac
ctcggcaacaccgtgatcgtcgtcgagcatgacgaggatgcgatccgccacgccgactat
gtcgtcgacatgggtccgggcgcgggcgtccacggcggcgagatcgtcgccgaggggacg
ctgaagcaggtgctggcgaacaagaagagcctgaccgcggcgtatctgacgggcgcgaag
aagatcgaggtgccgaagcaccgccgccccggcaacggcttcgacctcgtgctgaagggc
gcgcgcgccaacaacctcaacaatgtcaccgcgaaaatcccgctcggcaccttcacctgc
gtcaccggcctcagtggcagcggcaagtcgagcctgatcatcgacacgctctatgccagc
gcggcgcgcgtgctgaacggcgcgcgcatggtcgcggggccgcacgacagcctgaaaggg
cttgaacattgcgacaaggtgatcgacatcgaccagtcgccgatcggccgcaccccgcgc
tcgaaccccgcgacttatacgggcgctttcacggtgatccgcgactggttcgccgggctg
cccgaggcgcaggcgcgcgggtacaaaccgggacgcttcagcttcaacgtcaagggcgga
cggtgcgagacgtgcaccggcgacgggctgatcaagatcgagatgcacttcctgcccgac
gtctatgtcacgtgcgagacgtgccacggcaaacgctacaaccgcgaaacgctggaggtg
aagttcaagggcatgagcatcgccgacgtgctcgacatgacggtcgaggatgcggcggag
tttttcaaggcggtgcccgcgatccgcgacaagatggcgatgctggtgcgcgtcgggctc
ggctatatcaaggtcgggcagcaggcgacgacgctgtcgggcggcgaggcgcagcgggtg
aagctggccaaggaattgtcgcgacgatcgaccgggcagacgctctacatcctcgacgaa
ccgaccaccgggctgcatttcgaggatgtccgcaagctgctcgaagtgctccagcagctg
gtcgaccagggcaacagcgtgatcgtgatcgagcataatctggacgtcatcaagaccgcc
gactacatcctcgatcttggtccggaaggcggggtgaagggcggcgagatcgtcgcggcg
gggacgccggagcaggtggtgaaggagccgcggagctttaccgggcagtatctgaagccg
ttgctggcggcggggaaatag
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