Sphingopyxis sp. EG6: SPYCW_1368
Help
Entry
SPYCW_1368 CDS
T10392
Name
(GenBank) dihydrouridine synthase TIM-barrel protein nifR3
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
speg03016
]
SPYCW_1368
Transfer RNA biogenesis [BR:
speg03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
SPYCW_1368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
DHO_dh
NMO
NanE
SOR_SNZ
FMN_dh
ThiG
IMPDH
Motif
Other DBs
NCBI-ProteinID:
BBB08352
UniProt:
A0A2Z5UN85
LinkDB
All DBs
Position
1377921..1378919
Genome browser
AA seq
332 aa
AA seq
DB search
MAPLRPIQIGNITIADPVILAPMTGVTDLPFRKLVRYYGSGLNVTEMIASQAAIRETRQS
IQKAAWDPVEEPVSMQLVGCTPYEMGEAAKLNEDRGASIIDINMGCPVRKVTNGDAGSAL
MRDLKLAAALIDSCVKAVSVPVTVKMRMGWCHDSLNAPELAHIAEDLGAKLVTVHGRTRN
QMYRGEADWAFVRSVKDAVSIPVIVNGDICSADDARTALSQSGADGVMIGRGAYGRPWLL
GQVMAALRGEGERPDPSIDEQYDVITSHYRAMIDHYGEITGVNMARKHLGWYVKGLHGSA
EFRNMVNQIPSSRDVLEALERFYAPFLTKAAA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctgcggcccatccagatcggcaacatcaccatcgcggatcccgtgatcctc
gcgccgatgacgggcgtcaccgacctgccgttccgcaagctggtgcgctattatggttcg
gggctcaacgtcaccgagatgatcgcgagtcaggccgcgatccgcgaaacgcgccagtcg
atccagaaagccgcctgggatccggtcgaagagccggtttcgatgcagcttgtcgggtgc
accccctatgaaatgggcgaggcggccaagctcaacgaggatcgcggcgcatcgatcatc
gacatcaacatgggctgtccggtgcgcaaggtcaccaacggcgatgccggatcggcgctg
atgcgcgacctgaagctcgccgcggcgctgatcgacagttgcgtgaaggcggtgtcggtc
ccggtgacggtcaagatgcgcatggggtggtgccacgacagcctgaacgcgcccgaactg
gcgcatattgccgaggatctgggcgcgaagttggtgaccgtgcacggccgcactcgcaat
cagatgtatcgcggcgaggccgactgggcttttgtccgttcggtcaaggatgcggtgtcg
atcccggtcatcgtcaatggcgacatctgttcggcggacgacgcgaggaccgcgctgtcg
caaagcggcgccgacggggtgatgatcggtcgcggcgcctatggccgcccgtggctgctg
ggtcaggtgatggcggcgctgcgcggcgagggcgagcgccccgaccccagcatcgacgaa
caatatgacgtcattacatcgcattaccgtgcgatgatcgaccattatggcgagattacc
ggggtcaatatggcgcgcaagcaccttggctggtacgtcaaggggctgcacggatcggcc
gagtttcgcaacatggtcaaccagatcccgagcagccgtgacgtgctcgaggcgctcgaa
cgcttctatgcgcctttcctgaccaaggccgccgcgtga
DBGET
integrated database retrieval system
