Sphingopyxis sp. EG6: SPYCW_1438
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Entry
SPYCW_1438 CDS
T10392
Name
(GenBank) methylase/helicase
KO
K26273
protein strawberry notch
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
speg03036
]
SPYCW_1438
Chromosome and associated proteins [BR:
speg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SPYCW_1438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
AAA
Motif
Other DBs
NCBI-ProteinID:
BBB08422
LinkDB
All DBs
Position
1453270..1457577
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AA seq
1435 aa
AA seq
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MNIMSPVAVPAAPIVRASAIIAAAHRLLALLERGQRVDSASLRTAMETAFEASDATGVWD
WKTAYEACECATVLFLRKYGRALFRKADTPVARLSALSKITGLLPTHTRRSEESQALQQF
STPVPLGLAAIAAAAITPRDIVLEPSAGTGLLAILAEIIGGSLLLNELAETRTDLLSALF
PALAVTRVDAAQIDDHLPASAIPSVVLMNPPFSVMANVSGRVADAAYRHVASALARLADG
GRLVAITGANFGPEQPAWRDAFMRLQERGRVVFTAAIDGSVFAKHGTTIETRLTVIDKLP
AEDPALFPGSAGIAPDVATLLAWIEAQVPPRLPVTLPESAQPLFGSALRTVRGYLARTTT
ARPAAPSSIDPDGVELAYDTVDWTPPEGAHLTDAIYEEYGLQSIRISGSQAHPTKLVQSA
AMASIAPPKPAYRPMLPTGITDLLSDAQLETVIYAGEAHSDFLAGSWTVDATFDLVQAAP
TDAEKSVRFRRGFMLGDGTGAGKGRQSAGIILDNWLRGRRKAVWISKSDKLIEDAQRDWS
ALGMERLLVTPLSRFAQGKPITLSEGVLFATYATLRSDDRGEKVSRVRQIVDWLGSDFDG
VIIFDESHAMANAAGGKGERGDVAASQQGRAGLRLQHALPNARVVYVSATGATTVHNLAY
AQRLGLWGGEDFPFATRAEFVEAIEDGGVAAMEVLARDLRSLGLYTARSLSYDGVEYELV
EHALTDEQRGIYDAYAGAFAVIHNHLDAAMQAANITGDDGTLNRQAKSAARSAFESAKQR
FFGHLLTSMKTPTLIRSINRDFEDGHVAVVQIVSTGEALMERRLAEIPTEEWNDVRVDIT
PREYVLDYLAHSFPVQLYEPFTDGEGNLSSRPVYRDGQPVESREAVARRDELIERLASLP
PVPGALDQIVQRFGTDIVAEVTGRSRRIVRKGERLAVENRAPSANLTETAAFMDDLKRIL
VFSEAGGTGRSYHAELSAKNQRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIA
TNVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESSYARAALRQLYLLIVR
GKVGGCSLGRFEAATGLKLMDAGGIKDELPPITTFLNRLLALTIELQGILFTAFEQLLDA
KVAGAIASGVYDVGLETLTAESFVVTQRTTIYTHPATSAQTRLLAISERRRNRPTTLDTA
LGWLDDPQARLLVNARSGRAAVQVPAPSIMLDDGEIERRVRLIRPMEQHHATIAMMDDSH
WQEADRDTFASIWLREVAEVPAYTEGMIHMVSGLLLPVWKRLPNESTRVYRLQTDDGERI
IGRRVSPAWAANAASTGTSNLTSNEAYAALVDGRTILDLADGLQLRRARVMGANRVELSG
FTEAMRHRLRAYGLFSEIISWKLRFFVPVDTSGPAILGKLLDTYPVERISEREAA
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatgtcacccgtcgccgttccggctgcgccgatcgtccgtgcgtccgccatc
atcgccgccgcccatcggcttctcgccttgctcgaacgtggacagcgggtcgacagcgcc
agtctccgcacggctatggagaccgccttcgaggcttccgacgcgactggcgtctgggac
tggaagacggcctatgaagcctgcgaatgcgcgaccgtactgttcctccgcaaatacgga
cgtgcgcttttccgtaaagccgacactccggttgcacggctttccgccctgtcgaaaatc
accggcctcctgccgacgcacacccgtcgctccgaggaaagccaggcgctacagcaattc
tcgacgccggtcccgctcggtctcgcagccattgccgccgccgcgatcacgccgcgcgac
atcgtgctggagccttcggccggcacgggccttctcgccatccttgccgagatcatcggc
ggctcgctgctcctcaacgagctggcggaaacccgtaccgatctgctttccgctctcttc
ccggcccttgccgtaacgcgcgtcgacgccgcccagatcgacgatcacctcccggcgagc
gccattccctccgtcgtcctgatgaatccgccgttctcggtgatggcgaatgtctccggc
cgcgtggccgacgccgcctatcgtcatgtcgcctcggccctggcgcggctcgccgacggt
gggcgtcttgtcgcgatcaccggcgcgaacttcggtcccgagcaacccgcatggcgcgac
gccttcatgcggcttcaggagcgcggccgtgtcgtcttcaccgcggcgatcgacggctcg
gtctttgccaagcacggcacgaccatcgagacgcggctcaccgtcatcgacaagctgccc
gccgaagatccggccctgttcccgggatccgctggtatcgcacccgacgtcgccacgctg
ctcgcctggatcgaggcgcaggttccaccgcgcctgccggtcacactgcccgaatccgcg
cagcccctgttcggctcagcgctccgcaccgtgcgcggctatctcgcgcgcactaccacc
gcacgcccggccgcgccgtcgtccatcgacccggatggcgtcgaactcgcctatgacacc
gtggactggacgccgcccgagggggcacacctcacagatgcgatctatgaagaatacgga
ttgcagtcgatccgcatttccggctctcaggcgcatcccaccaagctcgtgcaatcggcg
gccatggcgagcatcgcgccgcccaagcccgcctatcggccgatgctaccgacgggcatc
accgatctgctgtcggacgcccagctcgaaaccgtcatctatgccggcgaggcccattcg
gactttctcgccggatcatggacggtcgatgcgaccttcgatctcgtccaggccgctccg
accgacgccgagaagagcgtgcgtttccggcgtggcttcatgctcggcgacggcaccgga
gcgggcaaaggccgccagtctgccggcatcatcctcgacaactggctgcgcggtcgccgt
aaggccgtctggatctccaaatccgacaagctgatcgaggacgcgcaacgcgactggtcc
gcgctcggcatggaacgcctgctggtcacgccgctgtcgcgctttgcccagggcaagcca
atcacgctgtcggaaggcgtcctatttgcaacctacgccacgctgcgctccgacgaccgc
ggcgagaaggtttcgcgcgtccgccagatcgtcgattggttgggctccgatttcgacgga
gtgatcattttcgacgagagccacgccatggccaatgccgctggcggcaagggagaacgc
ggcgatgtcgccgcttcgcagcagggacgcgcgggtctccggctccagcacgccctgccg
aacgcacgcgtcgtctatgtctccgccaccggcgcgaccaccgttcacaatctcgcctat
gcccagcgtctcggcctgtggggcggcgaggatttccccttcgccacccgcgccgaattc
gtcgaagccatcgaggacggcggtgttgctgccatggaggtgctcgcccgcgaccttcgc
tcgctcggcctctataccgcgcggtcgctctcttatgatggcgtcgaatatgagctggtc
gagcacgctctgaccgacgagcaacgcggcatctatgacgcctatgccggggccttcgcc
gtcatccataaccatctcgatgccgcgatgcaggccgccaacatcaccggcgacgacggc
acgctgaaccggcaggccaaatccgccgcgcgctcggccttcgaatccgccaagcagcgc
ttcttcggccatctgcttacgtcgatgaagaccccgacgcttatccgctccatcaaccgc
gattttgaggatggacacgtcgccgtcgtgcagatcgtctcgaccggcgaagcgctgatg
gaacgccggctggccgagatcccgaccgaggaatggaacgacgttcgcgtcgacattacg
ccgcgcgaatatgttctggactatctggcccactcctttccggtccagctctacgagccg
ttcaccgatggcgaaggcaatctgtcctcccgcccggtctatcgcgacggccagcccgtc
gagagccgcgaagccgtcgcgcgccgtgacgagctgatcgaacgtctcgcatcgctccca
ccagtccccggcgcgctcgaccagatcgtgcagcgcttcggcaccgatatagtggccgag
gtgacggggcgctcccggcgcatcgtccgcaagggtgagcgtctggccgtggaaaaccgg
gcgccatcggcgaacctcaccgaaaccgccgccttcatggacgacctgaaacgcatcctc
gtgttcagcgaagcgggcggcacaggccgcagctatcacgcagagctgtcggcgaagaac
caacgcctgcgggtgcattatctgctcgagccgggatggaaggccgatgccgccattcag
ggcctcggtcgcaccaaccgcaccaaccaggcacagccgccgctcttccgtcctatcgcc
acgaacgtcaaagccgaaaagcgcttcctgtccacgatcgcgcgccggctcgatacgcta
ggcgcgatcacgcgcggccagcgccagaccggcggccaaggcctgttccggcccgaggac
aatctggaatcgagctacgcccgcgccgcgctgcgccagctctatcttctgatcgtgcgc
ggcaaggtcggtggctgctcgctggggcgtttcgaggccgcgactggcctgaagctgatg
gacgcgggcggcatcaaggacgagttgcctccgatcaccacgttcctgaaccgcctcctg
gcgctgaccatcgagcttcagggcatcctcttcaccgcgttcgagcaactgctcgacgcc
aaggtggccggggccatcgccagcggcgtctatgacgtcggcttggaaacgctgacggcg
gagagcttcgtcgtcacccagcgcaccaccatctacacccacccggcgacgtctgcgcaa
acgcggttgctcgccataagcgagcgtcgccggaaccggccgaccacactcgatacggcg
ctcggttggctcgacgatccgcaggcacggctgctcgtcaacgcgcgttcgggacgagct
gctgtccaggtgccagcgccatccatcatgctcgacgatggcgagatcgaacgccgcgtc
cggctgatccgacccatggaacaacatcacgcaaccatcgccatgatggacgacagccat
tggcaggaggcggatcgcgacacgttcgcgtccatctggctgcgcgaagtcgccgaggtg
ccagcttacaccgagggcatgatccacatggtcagcggtttgctcctgcccgtgtggaag
cgtctgccgaacgagtcgacgcgggtctatcggctccagaccgacgatggcgagcgcatc
atcgggcggcgggtttcgcctgcctgggccgcgaacgccgcctctaccggcacgagcaat
ctcaccagcaacgaggcttacgccgctctggtggacggccgcaccatcctcgaccttgcc
gacgggctccagcttcgtcgtgcacgcgtcatgggcgcgaaccgggtcgaattgtcgggc
ttcaccgaggccatgcggcatcgcctgcgcgcctatggcctcttcagcgagatcatctca
tggaagctgcgcttcttcgttccggtcgacacctccggtcccgccatcctcggcaagctg
ctcgacacctatccagtcgagcggatcagcgagcgcgaggcagcgtga
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