Sphingopyxis sp. EG6: SPYCW_1569
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Entry
SPYCW_1569 CDS
T10392
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg03420
Nucleotide excision repair
speg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPYCW_1569
03430 Mismatch repair
SPYCW_1569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
speg03400
]
SPYCW_1569
Enzymes [BR:
speg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPYCW_1569
DNA repair and recombination proteins [BR:
speg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPYCW_1569
MMR (mismatch excision repair)
Other MMR factors
SPYCW_1569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
PCNA_N
Motif
Other DBs
NCBI-ProteinID:
BBB08553
UniProt:
A0A2Z5UC81
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All DBs
Position
1589053..1591365
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AA seq
770 aa
AA seq
DB search
MNMPPISTTDLTRPDPSDPPYLQGLNGPQRQAVLTTEGPVLMLAGAGTGKTAALTARLAH
IIATRRAWPSEILAVTFTNKAAREMRERIGRMIGDAVKGMPWLGTFHSIAAKMLRRHAEL
VGLQSNFTILDTDDQLRVLKQLIQAEGLDEKRWPARQLAGLIDKWKNRGLTPADLDAADK
EAYADGKGQHFYALYQARLKTLNACDFGDLLLHMLVILKTHRDVLEQYQARFKYVLVDEY
QDTNASQYLWLRLLAQARKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGATVIRLEQN
YRSTPQILAAASALIAQNSDRLGKTLWTELEPGDKLRVVGVWDGPEEARRIGEELETLQH
RGISLDRAAILVRAQFQTREFEDRFIAIGMPYRIVGGFRFYERAEIRDALAYLRLVQSPA
DDLAFERIVNVPKRGLGDKALQRIHQFARAERAPLFHAASRITETDELTPQARRQLANFV
AQMRGWQAKANELSHPELTQLILDESGYTAMLQADRSAEAAGRLENLSELVRAMEEYETL
EEFLEHVSLVMDRDNDEQVETVTIMTIHAAKGLEFDHVFLAGWEDGVFPSQRSMDEGGIA
SLEEERRLAYVAITRARQRASIYHAANRRIYGQWMSSIPSRFIAEIPPEHVDSENSFGGG
QSLWRANWSAQGDPFAHVAERQPSRIMTRGPAWQRATAQSSTITRAPAPSEKGPAASVGA
KPRADLAIGMRVFHEKFGYGEIADIDGNKLEVAFEQAGSKRVLDSFVRLA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatgccccccatctcgaccaccgacctgacccgccccgacccgtcggacccgccc
tacctgcaaggcttgaacgggccgcagcggcaggccgtgctgacgaccgaggggccggta
ctgatgctcgcgggcgccggcacgggcaagaccgcggcgctcaccgcgcggctggcgcac
atcatcgcgacgcggcgcgcctggccttccgaaatcctcgcggtgacctttaccaacaag
gcggcgcgcgagatgcgcgagcgcatcgggcggatgatcggcgacgcggttaaagggatg
ccctggctcggcacctttcacagcatcgcggcaaagatgctccgccgccacgccgaactg
gtgggtttgcagagcaatttcaccatcctcgacaccgacgaccagctgcgcgtgctcaag
cagctgattcaggccgaagggctcgacgaaaagcgctggcccgcgcgccagctcgcgggg
ctgatcgacaaatggaagaaccgcggactgacccccgccgatctcgatgccgccgacaag
gaggcttatgctgacggtaagggccagcatttctacgcgctctatcaggcgcggctgaag
acgctcaacgcctgcgatttcggcgacctgttgctccacatgctcgtgatcctgaagacg
caccgcgatgtgctcgaacaatatcaggcacgcttcaaatatgtgctcgtcgacgaatat
caggacaccaatgccagccagtatctctggctccgcctgctcgcgcaggcgcgcaagaat
atctgctgcgtcggcgacgacgaccagtcaatctattcgtggcgcggcgccgaggtcgcg
aacatattgcgcttcgaaaaggattttcccggcgcgaccgtcatccgcctcgaacaaaat
taccgctcgacgccgcagatccttgccgccgcctcggcgctgatcgcgcagaactcggac
cggcttggcaagacgctgtggaccgagcttgaacccggcgacaagttgcgcgttgtcggc
gtctgggacgggccggaggaagcgcggcggatcggcgaggagctcgaaacgctacagcat
cgcgggatcagcctcgaccgcgccgcgatcctcgtccgcgcgcagttccagacgcgcgag
ttcgaggaccgcttcatcgcgatcggcatgccctatcgaatcgttggcggtttccgcttc
tacgaacgcgccgaaatccgcgacgccctcgcctatctccgcctcgtccagtcacccgcc
gatgacctcgccttcgagcgcatcgtcaatgttccgaagcgcgggctcggcgacaaggcg
ttgcaacgcatccaccagttcgcgcgcgctgaacgtgccccgctgttccacgccgcatcg
cgcatcaccgaaaccgacgagctgaccccacaggcgcgtcgccagctcgccaatttcgtc
gcgcaaatgcggggctggcaagcgaaggcgaatgagttgtcgcaccccgagctgacccaa
ctgatcctcgacgaatcgggctacaccgcgatgctgcaggccgatcgcagcgccgaggcc
gcggggcgcctcgaaaacctctccgaactcgttcgcgcgatggaggaatatgagacgctc
gaggaatttctcgagcatgtcagcctcgtcatggaccgcgacaatgacgaacaggtcgag
acggtcacaatcatgacgattcacgccgccaaggggctcgaattcgaccacgtcttcctt
gcgggctgggaagacggcgtgttcccgtcgcagcggtcgatggacgaaggcggtatcgcc
agtctcgaggaggaacgccgcctcgcctatgttgcgatcacccgcgcccgccagcgcgcg
agcatatatcacgccgcgaaccgtcgcatctacggccagtggatgagcagcatcccaagc
cgcttcatcgccgaaatcccacccgaacatgtcgacagcgaaaacagcttcggcggcgga
cagagcctgtggcgcgccaattggtcggcgcagggcgatcccttcgcgcatgttgcggaa
cggcagccgtcgcggatcatgacacgcggcccggcgtggcagcgcgccaccgcgcaatcg
tcgacgatcacgcgcgctcctgccccgagcgaaaaaggcccggcggcgtcggtcggcgcc
aaaccgcgcgccgacctcgcgatcgggatgcgcgtgttccacgaaaaattcggctatggc
gaaatcgccgacatcgacggcaacaagctggaagtcgcctttgaacaggcgggcagcaag
cgcgtgcttgacagtttcgtccgcctcgcctga
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