Sphingopyxis sp. EG6: SPYCW_1622
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Entry
SPYCW_1622 CDS
T10392
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
speg03400
]
SPYCW_1622
Enzymes [BR:
speg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SPYCW_1622
DNA repair and recombination proteins [BR:
speg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SPYCW_1622
Prokaryotic type
SPYCW_1622
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBB08606
UniProt:
A0A2Z5UC02
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All DBs
Position
complement(1640840..1642228)
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AA seq
462 aa
AA seq
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MTAPIIIWFRRDLRLSDQAAVIAAAAAGPVIPVYILDDEMPKHRRMGAASRWWLHHSLAS
LDASLREKGSRLVLRRGRCDEQLAMIAEEAGATSVHCLRHYEPWWRNAEKAVAKRLDLVC
HDGNYLLPPGSLTTGGGTPYKIYTPYWRALKDHMPPPEPSNRPREIAAPGAWPNSDALAD
WGLLPTKPDWATGFAAEWEPGEAGARKRIAAFIDEAAYYDRQRNLPSREGSSRLSPHLHF
GEVSPATIWHRTADAGGSVDVFLGEIGWRDYAQNIILQFPDYGSRSARAAFDDHLPWRSG
SEADADLAAWQQGRTGYPIVDAGMRQLWTTGWMHNRVRMIAASFLIKHLLIDWRQGEQWF
WDTLVDADYASNAVNWQWVAGSGVDSNMFPRIMAPLTQSEKFDAAGYIREWVPELAELTE
PAIHDPEAFGQRPQSYPAKLIGHREARERALAAYDVMKARGN
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccgatcataatctggtttcgccgcgatctgcgcctttccgatcaggcggcg
gtcatcgcggccgcagcggctggaccggtgatcccggtgtatatcctcgacgatgaaatg
cccaagcatcgtcgcatgggcgcggcctcgcgctggtggttgcaccatagccttgccagc
ctcgacgccagcttgcgcgaaaagggatcgcgattggtgttgcggcgcgggcgctgtgac
gagcaactcgcgatgattgccgaagaagcgggcgcaacgtcggtccattgcctgcgccac
tatgagccttggtggcgcaacgccgaaaaagccgtcgcgaagcggctcgacctcgtctgc
cacgatggcaattacctgcttccgcccggatcgctgacgaccgggggtgggacgccatac
aagatctacacgccatattggcgcgccctcaaagaccatatgcccccgccggagccgtcg
aaccgcccgcgcgaaatcgcggcgccgggcgcgtggcccaattcggatgcgctggcggac
tgggggctgctgccgaccaagcccgactgggctaccggttttgcggccgaatgggagccg
ggcgaagcgggtgcgcgcaagcggatcgcggcgttcattgatgaggccgcctattacgac
cgccaacgcaacctgccgtcgcgcgagggcagttcgcgcctgtcgccgcacctgcatttc
ggcgaagtgtcgcccgcgacgatctggcaccggaccgccgatgccgggggctcggtcgat
gtctttctcggcgagattggctggcgcgattatgcgcagaacatcatcctgcagtttccg
gactatggcagccgcagcgcgcgcgcggcgtttgacgatcatttgccgtggcgcagcggc
agcgaggccgatgccgacctcgccgcctggcagcagggtcgcaccggctatccaattgtc
gatgccgggatgcgccagctgtggacgacgggatggatgcacaaccgcgtccggatgatc
gccgccagcttcctgatcaagcatctgctgatcgactggcggcagggcgagcaatggttc
tgggacacgctggtcgatgccgattacgcttcgaatgcggtgaactggcaatgggtcgcg
gggagcggggtcgacagcaatatgtttccgcggatcatggcgccgctcacccaatcggaa
aaattcgatgcggcgggctatattcgcgagtgggtgccggaacttgccgaactcaccgag
cccgcgatccacgatcccgaagccttcggccagcgtccgcaatcctacccggccaagctc
attggtcaccgtgaagcacgcgaacgcgcgctggctgcttatgacgtcatgaaggcgcgc
ggcaactga
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