Sphingopyxis sp. EG6: SPYCW_1683
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Entry
SPYCW_1683 CDS
T10392
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
speg Sphingopyxis sp. EG6
Pathway
speg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SPYCW_1683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
speg03019
]
SPYCW_1683
03009 Ribosome biogenesis [BR:
speg03009
]
SPYCW_1683
04131 Membrane trafficking [BR:
speg04131
]
SPYCW_1683
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
speg04147
]
SPYCW_1683
Messenger RNA biogenesis [BR:
speg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SPYCW_1683
Ribosome biogenesis [BR:
speg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SPYCW_1683
Membrane trafficking [BR:
speg04131
]
SNARE
SNARE associated proteins
Others
SPYCW_1683
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SPYCW_1683
Exosome [BR:
speg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SPYCW_1683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_33
AAA_5
CDC48_2
AAA_14
AAA_2
TIP49
Mg_chelatase
IstB_IS21
AAA_lid_PRS2_C
AAA_28
nSTAND3
AAA_18
NPHP3_N
Sigma54_activat
AAA_7
RNA_helicase
AAA_24
Vps4_C
AAA_30
AAA_3
AAA_17
DUF815
AAA_11
Zeta_toxin
ABC_tran
AAA_19
TsaE
AAA_25
Parvo_NS1
ATPase
NB-ARC
Sigma54_activ_2
bpMoxR
Viral_helicase1
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
BBB08667
UniProt:
A0A2Z5UT88
LinkDB
All DBs
Position
complement(1708715..1711042)
Genome browser
AA seq
775 aa
AA seq
DB search
MADAAVKEKQVKLQVANSRAEESGGGIARIPRSAMAQLGVTEGDIVEISGKRQTASRVVA
PYAEDEGLEVIRLDGLQRANAGAGAGDMVVLSRVEARPATRVVFAPAQENLRLQGSANAL
KRSFFGRPVVTGDTVATAGQQRLESGDMPQQLREMLNAPAYALAEVRLVVVSAAPKGVVF
IDENTEIELLPEYQEPQDARRTDVTYDDLGGLGETIDQLREMVELPLRYPELFRRLGVDP
PRGVLLHGPPGTGKTRLARAVANESEAQFFLINGPEIMGSAYGESEKRLRDIFEQAAKAA
PSILFIDEIDSIAPKRGQVTGEAEKRLVAQLLTLMDGLEPRTNLVVIAATNRPDAIDEAL
RRPGRFDREIVIGVPDESGRREILGIHTRGMPLSADVDLAELARTTFGFVGADMASLTRE
AAIEAVRRIMPKLDLAEGTIPPEVLEELRVTRDDFSNALKRVQPSAMREVMVQAPTTRWS
DIGGLDAAREKLIEGVELPLKHPEAFRRLGIRAAKGFLLYGPPGTGKTLLAKAAARESDA
NFISIKSSDLLSKWYGESEQQIARLFARARAVAPTIIFIDELDSLVPARGSGTSGEPQVT
ERVVNTILAEMDGIEEMQSVVVIGATNRPNLIDPALLRPGRLDELIYVSVPDKDGRRRIL
EIQTAKMPLAGDVDLAALAEKADRFTGADLEDLTRRAGLAALKRSINSDAVTMADFETAL
KDTRASVTEAMEKDYEKIQGEIKQAAMSVNPIGFFAPGMLKPVREQKHSDDVVKD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
ttggccgacgccgcggtaaaagaaaaacaggtgaaactgcaggtggcgaattcgcgcgcc
gaagaaagcggtggcggcatagcgcgcatcccgcgctcggcgatggcccagttgggcgtg
accgagggcgatatcgtcgagatcagcggcaagcgccagactgcctcgcgcgtcgtcgcc
ccctatgccgaggatgaggggctggaggttatccgcctcgacgggttgcagcgcgcgaat
gccggcgcgggtgcgggcgatatggtggtgctgagccgcgtcgaagcccgcccggcgacg
cgcgtcgtgttcgcccccgcgcaggaaaatctgcgtttgcagggatcggcgaacgcactg
aagcgcagcttttttggccgcccggtggtcaccggcgataccgtcgcgaccgcgggccag
cagcggctcgaatcgggcgatatgccgcagcagctgcgcgagatgctcaatgcgcccgcc
tatgcgctcgccgaagtgcggttggtcgtcgtctccgcggcgcccaagggggtcgtgttc
atcgacgaaaacaccgaaatcgaactgctgcccgaatatcaggagccgcaggatgcgcgc
cgcaccgatgttacgtacgacgatctgggcgggctgggcgaaacgatcgaccagctgcgc
gagatggtcgaactgccgctacgctatcccgaattgttccgccgcctgggcgtcgacccg
ccgcggggggtgctgctccatggcccgccggggaccggcaagacgcggctggcgcgcgcg
gtcgccaacgagagcgaggcgcagtttttcctgatcaacggccccgaaatcatgggttcg
gcctatggcgaatccgaaaagcggctgcgcgatatttttgaacaggcggcaaaggccgcg
ccgtcgatcctgttcatcgatgagatcgattcgatcgcgccgaagcgcgggcaggtgacg
ggcgaggccgaaaaacgcctcgtcgcgcagttgctgaccttgatggacgggttggagccg
cgcaccaacctggtcgtcatcgctgcgacgaaccgccccgacgcgatcgacgaggcgctg
cgccgtccgggccgcttcgatcgtgagatcgtgattggggttcccgacgaaagcggacgg
cgggaaatattgggtatccacacgcgcgggatgccgctgtcggctgacgtggaccttgcg
gaactcgcgcggaccacctttggttttgttggcgccgacatggcgtcgctgacccgcgaa
gcggcgatcgaggcggtgcggcgaatcatgccgaagctcgacctcgccgaagggacgatc
ccgccggaggtgctggaggaattgcgtgtcacgcgcgatgatttcagcaatgcgctgaaa
cgcgtgcagccgtccgcgatgcgcgaggtgatggtgcaggcgccgacgacgcgatggagc
gacatcggcgggctggatgcggcgcgtgaaaagttgatcgaaggggtcgagctgccgctc
aagcatcccgaagcctttcggcggctgggcatccgggccgccaagggctttctgctctac
ggcccgcccgggaccggaaagaccctgctggccaaggcggcggcgcgcgagtccgacgcc
aatttcatctcgatcaagtcgtccgacttgctgtcgaaatggtatggcgagagcgagcag
cagattgcccggctgttcgcccgtgcgcgcgctgtggcgccgacgataatctttatcgac
gagctcgacagcctggtccccgcccgcggcagcggcacatcgggcgagccgcaggtgacc
gaacgtgtcgtcaacacgatcctggcggagatggacgggatcgaggagatgcagtcggtg
gtcgtcatcggtgcgaccaaccgcccgaacctgatcgacccggcgctcctgcggcccggt
cggctcgacgagctgatctatgtttcggtgccggacaaggacgggcgccgccgcatcctc
gaaatccagaccgccaagatgccgctggcgggcgacgtcgatctggcggcgctggcggag
aaggccgaccgctttaccggcgccgatctggaagacctgacccgccgcgccggtctcgct
gcgctcaagcggtcaatcaacagcgacgcggtgacgatggcggatttcgaaacggcgctg
aaggatacccgcgcctcggtcaccgaagcgatggaaaaggattatgaaaagattcagggc
gagatcaagcaggcggcgatgagcgtcaatccgatcggcttttttgcgcccggcatgctc
aagccggtgcgcgagcagaagcattcggacgacgtggtgaaggattag
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