Sphingopyxis sp. EG6: SPYCW_1872
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Entry
SPYCW_1872 CDS
T10392
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
speg03032
]
SPYCW_1872
03400 DNA repair and recombination proteins [BR:
speg03400
]
SPYCW_1872
Enzymes [BR:
speg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SPYCW_1872
DNA replication proteins [BR:
speg03032
]
Prokaryotic type
DNA Topoisomerases
SPYCW_1872
DNA repair and recombination proteins [BR:
speg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SPYCW_1872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BBB08856
UniProt:
A0A2Z5UCM2
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All DBs
Position
1901671..1904400
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AA seq
909 aa
AA seq
DB search
MTEENTPTPPSEDGISPINIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSAF
ESGYVAGRPYRKSARIVGDVMGKYHPHGDSSIYDALARMTQDWSMSVPLVDGQGNFGSMD
PDPPAAMRYTESRLAKVANTLLGDLDKDTVDFQPNYDGSESEPTVLPARYPNLLVNGAGG
IAVGMATNIPPHNLGEVINATLATIDNPEITLDDLMAIVPGPDFPTGALMLGQGGARNAY
ATGRGSIMMRSTHIIEEGRNDRQSIVLTSIPFQVGKSGLVEKIAEAARDKRIEGVSDIRD
ESNREGVRVVIELKRDATAEVVLNQLWRHTPAQSSFPANMLAIRGGRPEMMGLKTILSAF
IDFREDVITRRCKFELNKARDRAHILLGLVVAVSNLDEVVRIIRGSSSPAAAREALLLRE
WPIGDIAPYIRLVEAIEGEVEEAATYRLSEVQVKAILDLRLHRLTALGRDEIGKELGELA
AEIEELLSILADRDKLYAVMREELVAVRDEFGKPRRTLLAPAADGIDDEDLIEREEMVVT
VTLDGYIKRTPLDTFRAQRRGGKGRAGMATKDEDVVTELFVTSTHTPVLFFSTAGKVYRM
KVWRLPEGGPATRGRPMINLLPLAQGETISTVLPLPEDEAEWGKLHVMFATARGSVRRNS
MDAFTNVPSNGKIAMKFEGEDEDDRLIGVALLDESDDVLLATRQGKAIRFAGDDVREFQS
RNSTGVRGMRLADGDEVISLSILHRVGTSSEEREAYLRAAPWKDNENEPTLEGDRMAELA
AREQFILTVCANGYGKLSSAYEYRRTGRGGQGITNIDNIGRNGPVVASFPATQAHQLMLV
TDQAKLIRMGLDTMRVIGRGSAGVRLFDVAKDEHVVSAALIEDGDEDEAEGLEATEAAAE
PPATDAPSA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaagaaaatacgccgacgccgccgtccgaagacggtatttcgccgatcaacatc
gtcgacgaaatgaagacaagctacctcgattacgcgatgagcgtgatcgtcagccgcgcg
ctgcccgacgtgcgcgacggcctgaagcccgtgcatcgccgcatcctctattcggcgttt
gaaagcggctatgtcgcgggccgcccgtatcgtaaatcggcgcgcatcgtcggtgacgtg
atgggtaaatatcacccgcacggcgacagctcgatctacgacgcgctcgcgcgcatgacg
caggactggtcgatgagcgtgccgctcgtcgatggtcagggcaatttcgggtcgatggat
cccgatccgccggcggcgatgcgctacaccgaatcgcgcttggcgaaggtcgcgaacacc
ctactcggggatctcgacaaggataccgtcgatttccagccgaactatgacgggtcggag
tccgaacccaccgtcctgccggcgcgctaccccaatctgctcgtcaacggcgccggcggc
atcgcggtcggcatggcgaccaacattccgccgcacaatttgggcgaagtgatcaacgcg
acgctcgcgacgatcgacaatcccgaaatcaccctcgacgacctgatggcgatcgtcccc
ggccccgatttcccgaccggcgcgctgatgctgggccagggcggcgcgcgcaatgcctat
gccaccggccgcggctcgatcatgatgcgctcgacgcacatcatcgaggaaggcaggaac
gatcgtcaatccattgtattgacgtcgattccgtttcaggtcggcaagtcgggcctagtc
gagaaaatcgccgaagcggcgcgcgacaaacgcatcgagggtgtgtccgacatccgcgac
gaatcgaaccgcgagggcgtccgcgtcgtcatcgaactgaagcgcgacgcgaccgccgag
gtcgtattgaaccagctgtggcgccacaccccggcgcagtcgagcttccccgccaacatg
ctcgcgatccgcggcggtcgccccgaaatgatggggctgaagacgatcctgtcggcgttc
atcgatttccgcgaagatgtgatcacccgccgctgcaagttcgagctgaacaaggcgcgc
gaccgcgcgcatatcttgctcgggctggttgtcgcggtcagcaatctcgacgaagtcgtc
cgcatcatccgcggctcgtccagcccggcggcggcgcgcgaggcgttgctgctgcgggaa
tggccgatcggcgacatcgcgccctatatccgcctcgtcgaagcgatcgagggtgaggtc
gaagaggcggcgacctatcggctgtccgaagtgcaggtaaaggcgatcctcgacctccgc
ctacaccgcctgaccgcgcttggtcgcgatgaaatcggcaaagagctcggtgagttggca
gccgagattgaggaactgctttcgatcctcgccgaccgcgacaaactctacgccgtgatg
cgcgaagaacttgtcgcggtgcgcgacgaattcggcaaaccgcgccgcaccctgctcgcc
cccgccgccgacggcatcgacgacgaggatctgatcgagcgcgaggagatggtcgtcacc
gtcaccctcgacggctatatcaagcgcaccccgctcgacaccttccgcgcccagcgccgc
ggtggcaagggccgcgctggcatggcgacgaaggacgaggatgtcgtcaccgagctgttc
gttacctcgacgcacaccccagtcctcttcttctcgaccgcgggcaaggtctatcgcatg
aaagtgtggcgcctgcccgaaggcggcccggcgacgcgcggccgcccgatgatcaacctc
ctcccgctggcgcagggcgaaacgatctcgaccgtcctcccgctgcccgaggacgaggcc
gaatggggcaagctgcacgtgatgttcgccacggcgaggggcagcgtgcgccgcaacagc
atggacgccttcaccaatgtcccctcgaacggcaagatcgcgatgaagttcgagggtgag
gacgaggacgaccggctgatcggtgttgccctcctcgacgagagcgacgacgtgctgctc
gcgactcgtcagggcaaggcgatccgctttgccggcgacgacgtccgcgaattccagagc
cgcaattcgaccggggtgcgcgggatgcgcctcgccgatggcgacgaagtcatttcgctg
tcgatcctccaccgcgtcggcaccagcagcgaggagcgcgaagcctatctccgcgccgcg
ccgtggaaggacaatgagaatgaaccgacgctggagggcgaccgcatggccgagctcgcc
gcgcgcgaacagttcatcctcacggtctgcgccaacggctatggtaagctgtcgtcagcc
tatgaatatcgccgcaccgggcgcggcggtcaggggatcaccaacatcgacaatatcggc
cgcaacggccccgttgtcgcgagcttcccggcgacgcaggcgcatcagttgatgctcgtc
accgatcaggcgaagctcattcgcatggggctcgacacgatgcgcgtcatcggtcgcggc
agcgcgggcgtccgcctgttcgacgtcgccaaggacgagcatgtcgtttcggcagcgttg
atcgaggatggcgacgaagatgaggccgaaggcctcgaggccaccgaggccgcggcggaa
cccccggcaacggacgcgccttccgcatga
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