Sphingopyxis sp. EG6: SPYCW_1897
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Entry
SPYCW_1897 CDS
T10392
Name
(GenBank) type II and III secretion system protein
KO
K02280
pilus assembly protein CpaC
Organism
speg Sphingopyxis sp. EG6
Pathway
speg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPYCW_1897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
speg02044
]
SPYCW_1897
02035 Bacterial motility proteins [BR:
speg02035
]
SPYCW_1897
Secretion system [BR:
speg02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
SPYCW_1897
Bacterial motility proteins [BR:
speg02035
]
Pilus system
Pilus assembly proteins
SPYCW_1897
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
BBB08881
LinkDB
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Position
1925929..1927494
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AA seq
521 aa
AA seq
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MNSKPNFKAAAMARTLAIGLVTATLVSAPVQPVAAQATQNASSSIDLSVGRGRLISLPAA
MTDIFVANDEVADVQVRSGRQLYIFGKKPGETSIYATDANGRVVFSTVARVGNNIETIDQ
MLSLAMPDASISANTMNGFVLLTGTVQSPDDAAEAEMLVQAFVGEGTKVLSRLRTATPLQ
VNLQVRIAEVNRTLVKEMSGNLLTRDTDGALGNGFLGGIFGGRSPGTITDIPAPTAVFPG
SPVPRPYDPATGLPLTNGRTTLGTNYQFTQPSGRRSLAGAGRLFGLDLMASLDIGERSGL
VATLAQPNLTAISGETADFLAGGEFPVPIPGNLAGTTIEYRKYGVSLAYTPTVLSNGRIS
LRVRPEVSELSTEGAIELDGFQVPALTVRRAETTVELGSGESFMIAGLMNNRSIGAIDKM
PGLGDVPLLGMLFKSDSFRRGETELVIVVTPYLVQPVSANDIKLPTDAYQDANDLQRILL
NQTGDGVTGGDRPKPRLDTSVGDADRPRGSSADAAPGFSIK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaaacccaatttcaaggcagcggccatggctcgcaccctggccattggcctg
gtcacagcgacgctggtttccgcgccggtacagccggtggcggctcaggcaacccagaac
gccagcagcagcatcgacctgtcggtgggccgtggccgcctgatcagccttccggctgcc
atgaccgacatcttcgtcgccaatgacgaagtcgccgacgtccaggtccgttcggggcgc
cagctttacatctttggcaaaaagccgggtgaaaccagcatttatgccaccgatgccaac
ggccgcgttgtgttctcgaccgtcgcccgcgtcggcaacaatatcgaaacgatcgatcag
atgctgtcgctggcaatgcccgacgcgagcatctcggcgaatacgatgaacggctttgtg
ctgctaaccggcaccgtccagtcgcccgacgacgcggccgaagccgaaatgctggttcag
gcatttgtcggcgagggtacgaaagtgttgtcgcgtctgcgcacggcaacgccgctgcag
gtcaatctgcaggtccgcatcgccgaagtgaaccgcactttggtcaaggaaatgagcgga
aatctgctgacccgcgacaccgacggtgcgctgggcaacggtttccttggcgggatcttt
ggcggtcgcagccctggcacgatcaccgacattccggcgcccaccgctgtctttccgggc
agcccggttcctcgcccctatgacccggccactggcctgccgctcaccaacggtcggacg
acgctgggcaccaactatcaatttacccagccgtcgggtcgacgcagcctggccggcgcc
ggtcgcctgttcggcctcgacctgatggcgtcgctcgacatcggtgaacgatcggggctg
gtcgccaccttggcgcagcccaatctgaccgcgatctcgggcgaaaccgccgacttcctg
gcgggcggcgaattcccggttccgatccccggcaaccttgccgggacgacgatcgaatat
cgcaaatatggcgtgagcctggcctatacgccgacggtgctgtcgaacggtcgtatcagc
ctgcgcgttcgccccgaagtatccgagctttcgaccgaaggcgccatcgagctcgacggt
ttccaggttccggccctgacggttcgccgggccgaaacgacggtcgaactggggtcgggt
gaaagcttcatgatcgccggcctgatgaacaaccggtcgatcggcgccatcgacaagatg
cccggtcttggcgacgtgccgctgctcggcatgttgttcaaatcggacagtttccggcgt
ggcgagaccgaactggttatcgtcgtgacgccctatctggtccagccggtgtcggcgaac
gacatcaagctgccgaccgacgcctatcaggacgcgaacgatctgcagcggatcctgctc
aatcagaccggtgacggcgtgacgggcggcgatcgtccgaagccgcgactcgacacgagc
gtcggcgacgcggatcgcccgcgcgggagcagcgccgacgccgcccccggcttcagcatc
aagtga
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