Sphingopyxis sp. EG6: SPYCW_2028
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Entry
SPYCW_2028 CDS
T10392
Name
(GenBank) methylase/helicase
KO
K26273
protein strawberry notch
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
speg03036
]
SPYCW_2028
Chromosome and associated proteins [BR:
speg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SPYCW_2028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
MTS
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBB09012
LinkDB
All DBs
Position
complement(2060759..2064991)
Genome browser
AA seq
1410 aa
AA seq
DB search
MSHANTAFAFSDPAEPKVLAAARALAARLAADQAISRLTVNTTMADHFGGSDAEGRWSIR
DAHAALELAQVLFLAQATELSLTMPSSAADEAFTRLEGLVPTQSNRSDEQIEWQQFATPP
RLAWMAVKACAISAAELVLEPSAGTGMLGVWAAKATARLALNEISPLRRECLGAVFPEAT
VTGFDGELIDELLTPDVGPSVVLMNPPYSHGIERGHDSRTGDRHLRSAWKRLLPGGRLVA
VMPEWFELPKFLAGIAGPVSLRLNATIERGFVKQGTSISTRLLVLDKAEDSHSPIIAQPA
NFAELHLLIDMLPDRVSLPAEPSIGIKSALPLRLVANRTKPVPLRGHPAVALPSILPLEF
TPLEAPAPIESQVGHYLPYRPSRISIADAVPHPTPLVESVAMGSITAPVPEVMPQLPSSI
IAEGVLSAAQAETLIYAASAHARDLPGRFEPDDKGCALKASAEGCAYRMGYFLGDGTGAG
KGRQVASVILDRWVRGERRHIWISKNEALLEDARRDWSALGGLPIDVQPLGQWKLGVPIG
MREGILFVTYPTLRSGRSDATRLEQILEWAGEDFDGLIVFDEAHAMANAAGGEGSRGKVK
GSEQGIAGVRIQNLLPRARVLYASATGASDINNLAYATRLGLWGPETAFANREAFVADIR
DGGIAAMELVARDLKSLGLYAARALSFAGVEYEILEHCLTPDQVAVYDAYADAWAIIHAN
LREALEATRIVDTDSGETLNSGAKSAALSVFEGTKQRFFAQLLLSMKLPSLLPAIDTALA
DGNAVVVQLVSTAEAMLNRRLADLSDAEREALEIDLSPREYVVDYLTKSFPVRLMSVFTD
ENGNARSEPMSDENGAPVLCHSALDARDRMIEQLCALPPIATALDAIIERFGVDQVAEVT
GRTRRLIVGRDGRQVLQSRSPRANVAETQDFMDGTKRILVFSDAGGTGRSYHADLAAKNQ
MRRVHFLLEPGWRADAAIQGLGRTNRTNQASAPLFRPVTTDVRGERRFISTIARRLDSLG
ALTRGQRQTGGQNLFDPADNLESTYAKEALHRWFGLLFAGKLEAVTLSRFEELSGLRVEG
PDGAMVDDLPTIQRWLNRILALPIALQNGIFDEFLGLVEARIDAARQAGTLDIGVETIAV
EHYEVLTDTLLRTDALSGATTHLLELEIARALKPLRLERLEELYGVSGSRQQLLRNARSG
RIGLLVPARSLLTDEGMRVARFELVRPLKHGHITADQLEESNWETVDPTEFQRLWQAEVD
DAASNLKRERLHLATGLLLPVWDKLPSDYVRVSRISARDGRSLLGREVPLHCVPELCQAL
GLEDEHAFSAEQIVDAVLGTGRPMQIKCREALTLKRSLVNGAQRLELAGWSASRLDWYKA
HGCFTEIIRYQTRLFVPTTNAVAVLARLVG
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgcaaataccgcttttgcattctccgatcccgccgagccgaaagtgttggcg
gcggcgagggcactggccgcgcggctcgctgccgatcaagcaatttcacggctcactgtg
aatacaacaatggcagatcacttcggcggtagcgacgccgaaggacgctggtccatacgc
gatgcccatgccgcacttgaattggcgcaggtgctattcttggcgcaggcaactgaatta
tctctcacgatgccatccagcgctgccgatgaggctttcacgcgccttgaaggtctggtc
ccgacccagtccaaccggagcgatgagcagatcgagtggcaacaattcgcaacgccgccc
cgtctggcctggatggctgtaaaggcatgcgcgatttctgccgctgaactggttctcgag
ccgtcggccgggaccgggatgctcggcgtatgggcggcaaaggcaactgcgcgtctcgct
ctcaacgagatatcgccgctgcgccgtgaatgtctgggcgccgtgtttccggaagcgaca
gtcaccggatttgacggggaactgatcgacgaacttctcacgcccgacgtgggtccgagc
gtggtgctgatgaatccgccctattcacatggtatcgagaggggccacgatagccgcact
ggcgaccgacacttgcgttctgcttggaagcgccttctgcccggtggccgcctggtcgca
gtgatgccagaatggttcgagcttccgaagttccttgccgggatcgccggtcccgtctcg
ttgcgcctcaacgcgacgatcgagcgcggtttcgtcaagcagggcacatcgatctcaacc
cggctcctggttctcgacaaggctgaggatagtcacagtccgatcatcgcccagccggca
aactttgccgagcttcatctgctgatcgatatgctgcctgaccgggtaagcttgcccgcc
gagcccagcatcggcatcaagtcggcattgccgcttcggctggtggcgaacaggacgaaa
ccggttccacttaggggccatccagcagttgcgctgccgtcgatcctgccgcttgaattt
actccgctcgaagcacctgcgccgatcgaaagccaggttgggcattatttgccttaccga
ccgagccggatctcgattgcagatgcggtcccgcatccgaccccgctggtcgaatccgtc
gcgatgggttcgataactgcacccgtgcccgaagtgatgcctcagcttccttcgagcatc
attgctgaaggcgtcttatccgctgcacaggccgagaccctgatctatgccgcaagcgcg
catgcccgcgatctgccgggccggttcgagcccgacgacaagggctgcgccttgaaggcg
agcgccgagggatgcgcctaccgtatgggctactttcttggtgacggaaccggtgcggga
aaaggccggcaggtcgcttccgtcatcctcgaccgatgggtgaggggcgaacggcgccac
atctggatttccaagaacgaagctctgctcgaagatgcccgccgcgattggagcgcgctc
ggcggccttcccatcgacgtccagccccttggccaatggaagctcggtgtcccgatcggg
atgcgcgaaggcatactcttcgtcacttacccgacgctgcgttcgggccgaagcgacgca
acccggctcgagcaaattctcgaatgggcaggggaggacttcgacgggctcatcgtcttt
gacgaagcccatgcgatggccaacgccgctggcggggagggctcacgtggtaaggtcaag
ggttcggagcagggcattgccggtgttcgcatccagaatctgctgccgcgcgcccgcgtg
ctctacgcttcggcgaccggggcatccgacatcaataatctcgcctatgccacccgtctt
ggcctttggggtcccgagacggcttttgccaatcgcgaagccttcgtcgcagatatccgc
gatggcggtatcgctgcaatggaactggtcgcgcgcgatctgaagtcactggggctgtat
gcggcgagggccctttcattcgccggagttgagtacgagattctggagcattgcctgacc
cccgaccaggtagcggtttatgacgcctatgcagacgcctgggcaatcattcatgccaac
ctgcgcgaagctctcgaggcaacgcggatcgtcgacactgacagtggcgagacactcaat
tcaggtgccaaatcggctgcgctttcggtgtttgaaggcaccaagcagcgcttcttcgcg
cagctccttttatcgatgaagctgccgagcctgctgcctgcgattgatacggcacttgcc
gacggcaacgcggttgtagtgcaactcgtctcgaccgccgaagccatgcttaaccgccgc
ctcgctgatctctccgatgcggaacgcgaagcactcgaaatcgatctctccccccgcgaa
tacgtggtcgattacctcaccaaaagctttccggtgcggttgatgtccgtgtttacggac
gagaacggcaatgctcggtccgaaccgatgagtgatgagaacggtgcccctgttctgtgt
cattcggcgcttgacgcgcgcgatcgcatgatcgagcagctctgtgccttgccgccgatc
gcgacggcgctcgatgcgatcatcgaacggttcggtgtcgatcaggtcgccgaagtcacc
ggccgtacccgccgcctgatcgtcggacgcgatgggcgccaggtgctccagtcgcgctct
ccgcgcgccaatgtagccgagacgcaagattttatggacgggaccaagcgaattctcgtt
ttctccgatgctggtggcaccggccgcagttatcatgccgacctcgccgcaaagaaccag
atgcgccgggtccacttcctgcttgagccgggctggcgggccgatgccgcaattcagggc
cttggccgtaccaaccgcaccaatcaggcgtcggccccgctgttccgccccgtgaccacc
gatgtgcgtggcgaacgtcggtttatatcgaccattgcacgtcggctcgatagcctcggg
gcactgacccgcgggcaacgccagacgggtgggcagaacctcttcgatcctgccgacaat
ctcgagagtacatacgccaaggaggcgcttcaccgctggttcggcctgctgttcgcaggc
aagttggaagctgttacgctttctcggtttgaggaattgagcgggctcagggtcgaaggg
cccgacggcgcgatggtagatgatctgccaacaatccagcgctggctcaatcgcatcctc
gcgttgccgattgctctgcaaaacggcatatttgacgagtttctcggcctcgtcgaagcg
cggatcgatgcagcacgccaggcgggcacgctcgacattggggtcgagaccattgcggtc
gagcattacgaggtgctgaccgacacgctactgcgcaccgatgcgctgtcgggtgcgact
acgcatctcctggaactcgagatcgcccgcgcgctcaagcctttgcgtctcgaacggctc
gaggaactctacggcgtttctggttcgcgtcagcaacttctgcgtaatgcgcgctcaggc
cggatcgggctgcttgtcccggcgcgaagtctgctcaccgacgaaggtatgcgtgtggcc
cgcttcgagcttgtccgccccttgaagcacgggcacattaccgccgatcaactcgaggag
agcaactgggaaacggtggatccaaccgaatttcagcgcctctggcaggctgaggtcgat
gacgccgcctcaaatctcaagcgcgagcgcctgcatcttgcaaccggcctgctgcttccg
gtgtgggacaaacttccttccgactatgttcgggtcagccggatctcggcgcgagacgga
cgctcgctcttaggtcgagaggttccgctccattgcgtgcccgaactgtgccaggcgctt
gggctggaagacgaacatgccttttcagcagagcaaatcgtcgatgcggtgctcgggaca
gggcgaccgatgcaaatcaaatgccgcgaagcgcttacgctcaagcgcagcctcgtgaat
ggcgcgcagcggcttgaactggctggttggtcggcgtcgcgcctcgactggtacaaggca
catgggtgcttcaccgagatcatacgctatcagacgcgacttttcgtcccgacgacgaac
gcggtggcggtcttggcgcgacttgtcggatga
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