Sphingopyxis sp. EG6: SPYCW_2055
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Entry
SPYCW_2055 CDS
T10392
Name
(GenBank) outer membrane adhesin like protein
Organism
speg Sphingopyxis sp. EG6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5801
Big_9
Cadherin_4
Cadherin_5
VWA
Motif
Other DBs
NCBI-ProteinID:
BBB09039
UniProt:
A0A2Z5UCN7
LinkDB
All DBs
Position
2095980..2105363
Genome browser
AA seq
3127 aa
AA seq
DB search
MELKRNDQVGEIATIARAIPPGATPILPVDGVIQLPPGTRLDAIKLSGNDLLVTLPDGQV
LVIVDGALRIPQIKVGPINIPAPTVAALIADQEPEPAAGRPQSSGGNFAQTPGDIGDPFA
LGNLLPPTEFGFPKILDLEVIPNAPDDKPKILITTPDQQVGVTAATAVVSEAALAARGAE
PAGTDPASPRESTSGTIQITALDQPAVVAVNGTVVTTVGQVITTPLGQVTITSITPGLIG
YSYTLTDNSTNPTATEIVTITVTDKDGDIGTATLTLTIEDDAPIARADIDDTLPGSNAPQ
GGNVITGAGTATGAAGADSPGADGALVTGVRSAAATDFSPTGTPVQGQYGRLVIAPDGTY
AYVRSAGTPGGVEDVFTYRLTDGDGDVTTATLTIRIGDSAPSLILPGAGDDGTFVDEAGL
PERDGESPGSREGDGSDFTSGVIQFAAGDGPATITINGVAITEEGQEIELANGTFYIIAI
NPDSIEYFFWLTDNTIGDNMSQLITVGITDLDGDTVSASFEIDIIDDVPEAVADFDSIPA
GTFGPATGNVITDAENDGGRDFPGADGATVSSVSGSGAPFAAGTPVAGLYGVLTLNSDGS
YSYVRNPGTPGGVFDTFTYRLTDGDGDTSTATLRIAIGDGGVTLSLPTGNGDGQQVSEAG
LPTGSAPGSGADTTAGSITFAATDGVSTVRINGETITAVGQTIAGEFGTLTITGITATSI
EYSYTLTEVTSGDDVMENFGVVVTDLDGDAASGTLSIVVEDDVPTAIDDLDSLQSGITNT
ADGNVLTGIGGVDANDSDGEADIEGADGASVTAIAFGGESGDINGFTVGAYGTLQITADG
NYLYTLDPENPDVAGLDGDDELTETFEYVITDADGDEATATLTVIIRGRDDIVTINGLNP
DGAEATVSEANLADGSAPDSDALLQLGSFTFSAADGVAAITLAGETIVAGLVITTDLGIL
TITDFEPVFDAAGDVVGGTISYSYELIDNSLLHSGPTDAALTESFAIEITDSDGTVAAAT
LDVLIQDDNPAAEADEGDVGEGQTLEVDAASGLLANDIPGADGGEILGVRAAGDNLSAPA
ISGVGAVIVGLYGQLTVAADGSYVYVANANIVPPDGAEDAFVYTLVDGDGDRSTTTLTIR
LSDAGLSAEAVQLQVNEAALATGSNPDSDAETVLGDLNDNVAGGTGPLEFSLVGNGVGTH
GTFTLNPDGTYFYTLTSTVDGVTANNGTNLVAAVETFTYNVTDAFGNVTQNVIVIDVIDD
VPVARSAPSITVAEDAPAITGNLLTNDTQGADGATVTSVTIGSTVVAVAATGITSFTNAN
GTYTFQANGAWSFDPVPQISVFPIHADFTYTITDGDGDQSSAVQQMRLADGSLPTASGPI
QLTVDDQHLESGSTPSPMQPVTSSGNIVFTPGSDAIASIGFGDISTLDGGLSWTLESDNQ
IIGWDADENPVVVIDLSLSGNVATVSVTLQYNYDLHPDTTIDDLVDLGSIEVVATDADGD
QVAGTVNISVSDDVPSITALSPTAGLLTVDETNLAMNATANFASLFNIVIGADQDGSSVS
YTFEVTTATGLVDVATGSKIILQAIGNVVEGRLQDSPSTVAFRLTVASNGQATLDQIRAI
RHPDATNPDDPVTLSPTIIRLTATVTDGDGDQASALVAIGSTLVFRDDGPSIDATNADTN
SITLTTQDADTRGSAFDVATANFSAAFSTSVVNFGADGPADAGAVTWTYSLALGSAAATS
ALTSNGVPVTLALVSGEIVGSAAGTPIFSIAVNAATGVVTLTQFAEIDHPLPGSAINYAA
QLVELAANLVELRGTATIVDRDGDSVSDTVAVDLGGNIRFADDGPSITAGGTGSTLTVDE
SDFATNATVNLSGLFNATTDFGADGPGFVTYELGVTAGASGLIDSLTGEPVILSIEGGVI
FGRTSTHEVFRISVAPGGLVTFDQSRAILHTPDSGPDQTKFLSGSNLITLTAIATDGDGD
TARATADITGQFAIRDDAPQAVHDEDNVSRDGEIFADGNVLTGIGGTDVNGMDGSPDNGG
ADGGLIVIGVAFGATTGTIGAALAGDYGSIVIAADGSYRYDLDPNDPAVIALNSSETLTD
TFQYTVRDADGDTSIATITISITGANDFPIARADTNWVLDGVSGSDPSASGNVLQDIAHP
GAPFGSFADVADNDPDLEAITVTSAGTYVGLYGTLVINGDGSYTYTLDEDKPVVNALDSG
QTLTESFAYTISDGSLSVGSTLTITVFGTNDAPTIGTAIARISEEGLPNGLPDTAPNATL
DTTNSTTFSGTLAIGDADAGETLTATLGNPGAVLTAGGVPVTWAGVGTGTLIGSVGGSEV
IRITLASNGAYTVTLSRAVDHPTVALEDLKDFFVPVSASDGTTTTTNASAIQIVIEDDAP
TATGETGSSSQPMQDVNTLFILDFSDSIDDSELNIMLEAVQGALAQLDSAASGALTIKFV
IFSSGSFASEAFSTAADANAYLDSLNPAAGGERPSQDDIGFNTNYTGAIQTALANFSAIP
GASNQVFFLSDGNPNQQTQFGGIPPMVTNSLTAATATAWNNFVDNNNVNVTAIGIDNNPL
QPLNIQRLRDVDLNAAPNNEPILVDDFEDLVATLLSVIVPSAVSGDLDANDFFGADGGRL
LSITIGSTTYTWDGASSIAVSSGGSIAGTTLNAIATPMGGTLTLNFATGQYNYQPPSPIT
VTATEVFNYVITDRDGDTATANLSVTITALAPPIAVDLDGDGVEFVSNAAGVSFDYNGDG
FAETTAWVGADDGLLAIDKNGDGKVNNGAELVFGGAGLSDLQGLAAAYDSNGDGKLDAAD
ADFAKFGIWQDANSNGVTDAGEFRSLISEGIISISLTSDGKAYTAADGQVQVKGEALYTR
ADGTTGKLADAAFATNFADQQRIAATNGAAGISTAMLVAGLAAATPLAARPPATPDGDNA
VANQQLGVSSEAAAQSDALPAAKADGLVHEYFSGPATARIEPENTQRQMDEDDRREAQSD
PADSAAPDPSYSELLAGTEVDLPPEPATATAASDQTQMALPPQAVADPAAAQLDTIVAAA
LEGPQVELDALLGPATPAEPVLARIMLGDGGTIGGIGDGASGHSFIADLAQQHVVVQLEQ
MASAGHA
NT seq
9384 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaagcggaatgaccaggtcggcgaaatcgccaccatagcacgcgccattccg
cccggtgcgacccctatcctgcctgtcgacggcgtcatccagttgccgcccggaacgcgg
ctcgacgcgatcaagctgtcgggcaacgacttgctggtcaccctgcccgacgggcaagtg
ctggtgatcgtcgatggcgcgctgcgcatcccgcagatcaaggtcggcccgatcaatatc
ccggcgcccaccgtcgcggcgctgatcgccgatcaggaacccgaacccgccgctggccgt
ccgcaaagttcgggcggcaatttcgcccagacgccgggcgacattggcgacccctttgcg
ctcggcaacctgctgccgccgaccgagttcggctttccgaaaattctcgaccttgaagtc
attcccaacgcacccgacgacaagcccaagatcttgatcaccacgcccgaccagcaggtc
ggcgtcaccgccgcgaccgccgtggtctctgaagcggccttggccgcgcgcggcgcggaa
cccgccgggacagaccccgcatcaccgcgcgaatcgaccagcggcacgatccagatcacg
gcgctcgaccaaccggccgtcgttgcggtgaatggcaccgtcgtcaccacggtcggacag
gtcattacgaccccgctgggccaagtgaccatcaccagcatcaccccgggactgatcggc
tacagctacacgctgaccgacaacagcaccaacccgaccgccaccgaaatcgtgacgatc
accgttaccgacaaagacggcgacatcggtaccgctacgctgacgctgaccatcgaagac
gatgccccgattgcgcgcgccgacatcgacgacacattgccgggcagcaacgcaccgcag
ggcggcaatgtcatcaccggtgccggtaccgccacgggtgcggcgggtgccgattcgcct
ggcgccgacggcgcgctggtcaccggcgtgcgcagcgccgccgccaccgatttcagcccg
accgggacgcccgtacagggccaatatggccggctggtgatcgcccccgacggcacctat
gcctatgtccggtcggcgggaacgccgggcggcgtcgaagatgtcttcacctatcggctg
accgacggcgacggcgatgtcacgaccgcgacgctgacgatccggatcggcgacagcgcg
cccagcctgatcctgcccggtgcaggcgacgacggcacctttgtcgacgaggccggcctg
cccgaacgcgacggggaaagccccggctcgcgggagggtgacggttccgatttcacgtcg
ggggtgatccagtttgcagcgggtgacgggccggcgaccatcaccatcaatggcgttgcg
attaccgaagagggccaggaaatcgagctggccaacggcaccttctacatcatcgcgatc
aacccggactcgatcgaatatttcttctggctgaccgacaacacgatcggcgacaatatg
tcgcaattgatcaccgtcggcatcaccgacctggacggcgataccgtatcggcgagtttc
gagatcgacatcatcgacgatgttcccgaagccgtcgccgatttcgacagcatccctgcg
ggtacctttggccccgccaccggcaatgtcatcaccgacgccgaaaatgacggtggacgc
gatttccccggtgccgacggtgcaaccgtgtcgtcggtttcgggcagcggtgcccccttc
gcagcgggaacccccgtcgcggggctgtacggtgtcctgacgctgaacagcgacggcagc
tacagctatgtgcgcaatcccggcaccccggggggcgttttcgacacctttacctatcgg
ctgaccgacggcgatggcgatacgtcgaccgcgacgctgcggattgcgatcggcgatggc
ggcgtcaccctgtcgcttccgacgggcaacggcgatggccagcaggtgtccgaggcgggc
ctgccgaccggatcggcgccgggcagcggcgccgacaccaccgcagggtcgatcaccttt
gccgcgaccgatggcgtcagcacggtgcggatcaatggcgagacgattacggcggtcggc
cagacgatcgcgggcgagttcggcacgctcaccatcaccggcatcacggcgacctcgatc
gagtatagctacacattgaccgaggtgaccagcggcgacgatgtcatggagaatttcggc
gtcgtggtcaccgacctcgacggcgacgccgccagcggcacgctgagcatcgtggtcgag
gatgacgtcccgaccgcgatcgacgatctggactcgctgcaatcgggcatcaccaacacc
gctgacgggaatgtcctgacgggcattggcggcgtcgatgccaacgacagcgacggtgaa
gccgatatcgagggtgcggacggcgccagcgttaccgccatcgcgttcggcggcgaaagc
ggcgacatcaacggctttaccgttggcgcctatggcacgctgcaaatcacggcggacggc
aactatctctacacgctcgaccccgagaacccggacgtcgccggactcgatggcgacgac
gagctgaccgagacgttcgaatatgtgatcaccgacgccgacggcgacgaagcgaccgcc
acgctgaccgtgatcatccgcggccgcgacgacatcgtgacgatcaacggattgaacccc
gatggcgccgaagccacggtgtcggaagccaacctggccgacgggtcggcgcccgacagc
gacgcgctgctccagctcggcagctttaccttcagcgccgccgatggcgtcgccgcgatc
acgctggcgggcgagacgatcgtcgcggggctggtgatcaccaccgacctgggcatcctg
acgatcaccgatttcgaaccggtgttcgatgcggcgggcgatgtcgtcggcgggacgatc
agctacagctatgaactcatcgacaacagcctgttgcacagcggcccgaccgacgccgcg
ctgaccgaaagctttgcgatcgagatcaccgacagcgatggcactgtcgcggcggcaacg
ctcgacgtcctgatccaggacgacaatccggcagcggaagctgacgagggcgacgtcggt
gaaggccagacgctggaagtcgatgcggcaagcgggctgctcgccaacgacattccgggt
gccgatggcggcgaaatcctgggcgtgcgcgcggcgggtgacaatctgtcggcgccagcg
atcagtggggtcggcgcggtcatcgttggtctgtacggccaactgacggtcgccgccgat
ggcagctacgtctatgtcgccaatgcgaacatcgtcccgcccgacggcgccgaggatgcg
tttgtctatacgttggtcgatggcgacggcgaccgatcgacgacgacactgaccattcgc
ctgagcgacgccggtctgtccgccgaggcggtccagttgcaggtcaacgaagccgcgctt
gccaccggcagcaatccggacagcgatgcggaaacggtgttgggcgatctcaacgacaat
gtcgcggggggcactggtccgctggaattcagcctggtcggcaatggcgtgggtacgcat
ggcaccttcacgctcaatcccgacggcacctatttctacacactgaccagcacggtggac
ggggtgaccgcgaacaatggcaccaaccttgtcgccgcggtcgaaaccttcacctataat
gtcaccgacgcattcgggaacgtcacccagaatgtcatcgtcatcgacgtgatcgacgat
gtcccggtcgcgcggtcggccccgtcgattaccgtcgccgaagacgcgccggcgatcacg
ggcaatctgctgaccaatgacacgcagggcgccgacggggcaacggtgacgtcggtgacg
atcggcagcaccgtcgtggcggtcgccgcaaccggcattaccagtttcaccaacgccaac
ggcacctacaccttccaggccaacggtgcctggagctttgatcccgtgccgcaaatcagc
gtgttcccgatccacgccgatttcacttacacgatcaccgacggcgacggcgatcagtcg
tcggcggtgcagcaaatgcgccttgccgacggcagcctgccgaccgcgagcggcccgatc
caactgaccgtcgacgaccagcatctcgaaagcggttcgacgccgtcgccgatgcagccg
gtcacgtcgagcggcaacatcgtgttcactccggggtccgatgccatcgcatcgatcggc
tttggcgacatttcgacactcgacggtgggctcagctggacgctggaatccgacaaccag
atcatcggctgggacgccgacgagaatccggtggtcgtgatcgacctcagcctgtcgggc
aacgtcgcgacggtgtccgtcacgctgcaatataattacgatctgcatcccgacacgacg
atcgacgatctggtcgatctgggatcgatcgaggtggtggcgaccgacgccgacggcgat
caggtcgcgggtacggtcaatatttcggtatcggacgacgtgccgtcgattaccgccttg
tcgccgaccgcagggctgctgacggtcgatgaaaccaacctcgcgatgaatgcgactgcc
aatttcgccagcctgttcaacatcgttatcggtgccgatcaggacggcagcagcgtcagc
tataccttcgaggtgacaacggccaccgggctggtcgacgtcgccaccgggtcgaagatc
atcctgcaggcgatcggtaacgtcgtcgagggacggctgcaggattcgccgtcgacggtc
gcgttccggctgaccgtcgcctccaacggacaggctacgctcgaccagatccgcgccatc
cgtcaccccgatgccaccaaccccgacgatccggtaaccttgtcgccgacaatcatccgg
ctgaccgcgacggtgaccgacggcgacggcgaccaggcgtcggcgctggtcgcgatcggc
agcacgctggtgttcagggacgacggcccgtcgatcgacgcgaccaacgccgataccaac
agcatcaccctgacgacgcaggatgccgatacacgcggcagcgcgttcgacgtcgcgacc
gccaatttttcggcggccttttcgacttcggtggtcaattttggcgccgatggtcccgcg
gatgcgggcgcggtcacctggacctattcccttgcgctgggctcggcggccgcgacctcc
gccctgaccagcaacggcgtgccggtcacgctggcccttgtctccggcgagatcgtcggc
agcgcggccggcacgcccattttttccatcgcggtgaacgccgccaccggcgtcgtcacg
ctgacccaatttgccgagatcgaccatccgttgccgggttcggccattaactatgccgcc
cagctcgtcgagctggcggccaatctggtcgagctgcgcggcaccgcgacgatcgtcgat
cgcgacggcgacagcgtgtcggacaccgttgccgtcgatctgggcgggaatatccgcttt
gccgacgacggtccgtcgatcaccgctggcggcacaggatcgacgctgaccgtcgacgaa
agcgactttgcgaccaatgcgacggtcaatctgtcggggctgtttaacgcaaccaccgat
ttcggtgccgatggtccgggttttgtcacctacgaattgggtgtcaccgccggagcgagc
ggcctcatcgactcgctcaccggcgagccggttatcctgtcgatcgaaggcggcgtgatc
tttggccgcacatcgacgcacgaggtgttccgcatctcggtggccccgggcggtctggtc
accttcgaccagtcgcgcgcgatcctgcacacgcccgacagcggtcccgatcagacgaaa
ttcctctcgggaagcaatctgatcacgctcaccgccatcgcgaccgacggcgacggcgac
acggcgcgcgcgacggccgacattaccgggcagttcgcgatccgcgacgatgccccgcag
gcggtgcacgacgaggacaatgtgtcgcgcgacggcgagatttttgccgacggcaatgtg
ctgaccggcatcggcggcaccgatgtcaacggcatggacggatcgcccgacaatgggggt
gccgacggcgggctgatcgtgatcggcgtggcattcggggcgacgacgggaacaatcggc
gctgccctcgcgggtgactatggttcgatcgtgatcgccgccgatggcagctatcgttac
gatctcgaccccaatgacccggcggtcatcgcgctcaattccagcgagaccctgaccgat
acattccagtacacggtgcgcgacgccgacggcgacacgtcgatcgcgacgatcaccatc
tcgatcaccggcgccaatgatttcccgatcgcgcgtgccgataccaattgggtgctcgac
ggcgtcagcggttcggaccccagcgcgtcgggcaatgtgctgcaggacatcgcgcatccc
ggggcgccgtttggcagctttgctgacgttgccgacaacgaccccgatctggaggcgatc
accgttacctcggctggtacctatgtcgggctgtacggtacgctcgtcatcaatggcgac
ggcagctacacctatacgctcgacgaggacaaaccggtagtcaacgcgctcgacagcggc
cagacgctgaccgaaagctttgcctatacgatcagcgacggatcgctctcggtcggatcg
acgctgacgatcacggtgttcggcaccaacgacgcgccgacgatcggtacagcgatcgcg
cggatttccgaagaagggctgccgaacggtctgcccgatacggcgccgaacgcgacgctc
gatacgaccaacagcacgaccttcagcggcacgctggcgatcggtgacgccgacgcgggc
gagacgctgaccgcaacgctcggcaatccgggtgcggtgctgaccgcaggcggtgttccg
gtgacctgggccggggtcggcaccggaaccctgatcggttcggtcggcggatcggaagtc
atccggattacgctggcgtccaatggcgcttacaccgtgaccctgtcacgcgcggttgat
cacccgaccgtcgcgctcgaagacctcaaggacttcttcgtgcccgtgtcggcatccgac
ggcacgacgacgacgaccaatgcgtcggcaatccagatcgtgatcgaggatgacgcgccg
accgccacgggcgaaaccggatcgtcgtcgcagccaatgcaggatgtgaacacgctcttc
atcctcgatttcagcgacagcatcgacgacagcgaattgaacatcatgctggaggcggtc
caaggcgcgcttgcgcagctggatagcgcggcatcgggggcgctcacgatcaagttcgtg
atcttctcgtcgggctcattcgcctcagaggcgttttcgaccgcagccgacgcaaacgcc
tatctcgactcgctcaacccggcggcaggcggcgaacgcccgtcgcaggacgacatcggg
ttcaacaccaactacaccggcgcgatccagaccgcgctggccaacttcagcgccatcccc
ggcgcaagcaaccaggtgtttttcctgagcgacggcaacccgaaccagcagacgcagttc
ggtggcatcccgccgatggtcaccaattcgctgaccgccgcaacggcaacggcgtggaac
aatttcgtcgacaacaacaatgtcaacgtcaccgcgatcggcatcgacaacaatccgttg
caaccgctcaacatccagcggctgcgcgacgtcgacctgaacgccgcgccgaacaacgag
ccgatcctggtcgacgatttcgaagatctggtggcgaccttgctgtcggtgatcgtcccg
tcggcggtgtcgggcgatctcgacgcgaacgacttctttggcgccgatggcggacgcctg
ctgtcgatcaccatcggttcaaccacctatacctgggatggcgcgtcaagcatcgcggtg
tcgagcggcggcagcattgccggaacgacgctgaatgcgatcgccacgccgatgggcgga
accctcacgctgaacttcgcgacgggccagtataattaccagccgccgagcccgatcacg
gtgaccgcgaccgaagtgttcaactatgtcatcaccgaccgcgatggtgacaccgcgacc
gcgaacctgtcggtgaccatcaccgcgctcgcaccgccgattgcggtcgatctggacggc
gacggggtcgagttcgtgtcgaacgccgccggggtcagctttgactataatggcgacggc
ttcgccgaaaccaccgcctgggtcggcgccgacgacggcctgctggcaatcgacaaaaat
ggcgatggcaaggtcaacaacggcgccgagctggtgttcggcggcgcgggcctgtccgat
ctgcaaggtcttgctgccgcctatgacagcaatggcgatggcaagctcgacgctgccgac
gccgatttcgcaaaattcgggatctggcaggatgccaacagcaacggcgtgaccgacgct
ggcgaattccgatcgctgatcagcgaaggcatcatcagcatttcgctgacctccgacgga
aaggcttataccgccgccgacggacaggtgcaggtcaagggtgaagcgctctacacccgc
gccgacggcaccacgggcaagcttgccgacgcggctttcgccaccaattttgccgaccag
caacggatcgccgcgaccaatggcgccgcgggcatttcgaccgcgatgctggtggccggg
ctggccgcagcaacaccgctggcagcccgtccccccgcgacgcccgacggcgacaacgcg
gttgcgaaccagcagctcggggtatcgagcgaagccgccgcgcaatcggatgccctgccc
gctgccaaggccgacggactggtccacgaatatttctccggcccggcgaccgctcgcatc
gagcctgaaaatacccagcggcagatggatgaggatgatcgccgcgaagcgcagagcgac
cccgccgatagcgcggcgcccgacccaagctattcggagctgcttgccgggaccgaggtc
gacctgccgcccgaacccgcaacggcaaccgccgcgagcgaccagacgcagatggcgctg
ccgccgcaggccgtcgccgaccccgccgccgcgcagctcgacaccatcgtcgccgccgcg
ctggaaggaccgcaagtcgaactcgacgcgctgctcggtccggcgacgccagccgaaccg
gtactggcccgcatcatgctgggcgacggcggaacgatcggcgggatcggcgacggcgca
tcgggccattcgtttatcgccgacctcgcgcagcagcatgtggtggtgcagctcgaacaa
atggcgtcggccggacacgcctga
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integrated database retrieval system
