Sphingopyxis sp. EG6: SPYCW_2144
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Entry
SPYCW_2144 CDS
T10392
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
speg Sphingopyxis sp. EG6
Brite
Enzymes [BR:
speg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SPYCW_2144
Transfer RNA biogenesis [BR:
speg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SPYCW_2144
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Other DBs
NCBI-ProteinID:
BBB09128
UniProt:
A0A2Z5UDP0
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Position
2199429..2200616
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AA seq
395 aa
AA seq
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MQVHPLIETNAALVEFCDRIRNSDFIAVDTEFMRENTFWPELCLIQVADREHAAAIDPMA
PGIDLKPLLDLLVDNEDMLKVFHAGGQDVEIIFNLTGKTPHPIFDTQIGQMAIGQAEQVG
YSNLVEAWIGLQLDKGARFTDWSRRPLDKRQIDYAVGDVTHLAKIFPMMLDKLVKTGRGH
WLDEEMEKLADPANYSVDPDKAWQRIKIPSRKPDVLGRLQALAAWREREARSKNLPRGRI
VKDETLADLAAHPPKDQDGLGRVRGLSATWRSNDIGARLMDALANARPMDKDDMPDRAPR
GPGLGKEGVLVADLLKLLLKIRARELNVAARLIARSDDLEALAAGAREGIAMMRGWRYDV
FGHAALDLVEGRMGFAVKNGKLVMSEIDAAAASEG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtccatccgttgatcgaaaccaacgccgcgctggtcgaattttgcgaccgcatt
cggaacagcgatttcatcgcggtcgataccgaattcatgcgcgaaaataccttctggcca
gagctttgcctgatccaggtcgccgaccgcgagcatgccgcggcgatcgatccgatggcg
cccggcatcgacctgaagccgcttctcgacctgctggtcgataacgaggatatgctgaag
gtctttcacgccggcggccaggatgtcgaaatcatcttcaacctgaccggcaagaccccg
catccgattttcgacacccagatcggccagatggcaatcggtcaggccgaacaggtcggc
tattcgaacctggtcgaggcgtggatcgggctgcaactcgacaagggcgcgcgctttacc
gactggagccgccgcccgctcgacaagcgccagatcgactatgcggtgggcgacgtcacc
catctggccaagatttttccgatgatgctcgacaagctggtcaagaccggccgcgggcat
tggctggacgaggaaatggaaaagctggccgatccggcgaattacagcgtcgatccggac
aaggcgtggcagcggataaagatcccgtcgcgcaaacccgacgtgctgggccgcttgcag
gcgctggcggcgtggcgcgagcgcgaggcgcgatcgaagaatttgccgcgtggacgcatc
gtcaaggacgagaccctggccgacctggccgcgcatccgcccaaggatcaggacggcctc
ggccgcgtccgcgggctgtcggcgacctggcgcagcaacgacatcggcgcgcggctgatg
gacgcgctggcgaacgcccgcccgatggacaaggacgacatgcccgaccgtgcgccgcgt
ggtccggggttgggcaaggaaggcgtgctcgtcgccgacctcttgaagctgctgctcaag
atccgcgcccgcgaactcaatgtcgcggcgcggctgatcgcgcgcagcgacgatctggag
gcgctggccgccggcgcgcgcgagggcatcgcgatgatgcgtggatggcgctacgacgtc
ttcggccacgccgcgctcgatctggtcgagggacggatgggttttgcggtcaagaacggc
aagctggtgatgagcgaaatcgacgcggcggccgcgagcgagggttaa
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