Sphingopyxis sp. EG6: SPYCW_2306
Help
Entry
SPYCW_2306 CDS
T10392
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
speg Sphingopyxis sp. EG6
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Calx-beta
Big_9
SprB
Cadherin_4
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
BBB09290
LinkDB
All DBs
Position
complement(2381647..2388720)
Genome browser
AA seq
2357 aa
AA seq
DB search
MKLAVLRVAMARWMAIAVLVVLGALLPQSASAQHTSAECPPQSATVTSGGTVTINISDCE
FPGNGGLGDIDGGSFGPADLEDHGTATTRRTGGEWFLDYSHNGTTGIGSTDVFELADGSL
GGTGDIRFTITINASASPITVTPGSLPTLTAGAAFSQTLSASGGLAPYSYTLQSGVLPPG
LSLTTGGILSGTPTQRGAYSFSVRATDSTSPTAQFVDKGYTGSVQNPSLSLATSTVTLVS
GQAASAQLATNGGVSPHIYATEPPGTPMPFGLSLSSGGLITGTPSSTGTATIQLRVTDGS
TGLAPYFELETLTINVIAPPSVSIAVAPASVSEDGATNLVYTVTRSAGSASPLIVNLATS
GMATSGTDYNGGVASVTIPANATTATVTIDPTVDGTVEADETVTLTVAAGAGYVVGVPAS
ATGTILNDDLPTASITVSPASVVENDGPNLVYTIALSSAAVSPLTINYTIGGDAINGADY
GPIGTSVVIAAGATSQTIIVNPNNNGTIEPHETVILTLAAGAGYTIGAPNSATGTILNDD
FPSVAVSSVTANEGNSGTTNMAFTVDLSAPAATGGVTFDIATFNGTATAGQDYVANSQTG
VVIPAGATSATFTVVVNGDMLNEANETFFVRIANVTGAFVNGSQGTGTITNDDAQPTLSI
SSPSIVEGNIGTRTLNFVMALDAPSGLGVTVNVATANGTATAGSDYVAASGGFSFAPGET
SKTFPVTVNSDTAPEGDESFTVTMSGVTNATIGANPGTGTITNDDVPLDIQPVNLPSGTV
GILYSAILTTSGGVSPYSYAVTAGAIPTGLTFNPNGTLSGTPVAAGNFSFTITATDSSGA
PGPFTASRAYTVAIAAPTIVLDPVTLPNATFGVAYSQTITADGSIAPYSFAVTSGSLPPG
LTLAPGGTLSGTPTLSGSWGFTITATDATAAPGPYAGARAYSITVAQVPLVLPPTTLPDG
ATDVAYSAQIASATGGVAPYSYVVTSGELPYGLTMSASGAITGTPTTANLFSFVVTATDS
DGGVGPQVVQQSYSINIVNTPPVVGAVTANVAYGAGLTPIPLSITGTANSVAVVTPPTAG
RAIVDRMTISYIPDTGFAGTDSFTYLASNNGANSAPATVTISVANPAITITAGGPLTATV
GVPYGETFTFNGGTQPFTNYQVTGLPAGVQVGSSGANTVAIIGTPTSAGSFPITVSATDA
STGTGPFSTSQVFTLVVAAPTLSMTPGAGTLTAAYNTLFSQAFTASGGVGPFTYALTGAL
PAGLTFAGNSLSGTATAPGSYPVTVTATDTGSTGTGSPFTIAQNYIINVPAPTIMISPES
LPNGTVGASYSQTASASGGVAAYGYAVSAGALPPGLSLSAGGVIAGTPTAGGSFNFTLTA
TDANAQTGSRAYTLAIGAALVSLPPTTLAGGQVGFAYNAPLNPASGGTAPYSYVVTGGAL
PGGVTLSAGGTLSGTPTAFGTFNFAVTATDSSTGSGPYAATQNYTLLVEQPAPIANPVSA
TVAYGSTANPIVLNLTGGAAASVAIVTSPANGTAVASGASITYTPNAGYAGGDSFTYTAT
NAGGTSAPATVTIAVANPAIAITADGPLTATVGTAYSQTFTFSGGAQPFSGYQVTNLPSG
LAISGSSANSVTIAGTPTAAGSFALAVSGTDASTGSGPFSTSQTFTLAVSAPTLALTPAM
GSFTATYAAAYSQALTATGGVGPYSYSLTGNLPAGVTLNSSTGLLSGSPTASGSFSFAVT
ATDTGSTGAGAPFTVQGNYSLTVAAPLVAVTPTTLPVATAGAAYSATLTAAGGVGPYRFV
LNGGALPAGLALSPGGIVSGTPTAAGAFAFTVNVTDANGQTGAASLTLNVANSAITVTPV
TLPGGTQGVAYSQRITAAGGIAPYSFAVSSGALPAGLAINATTGVIAGTPTGSGDATFAI
TVTDSTGGTPSTATITYTLRIVARPNPANDPEVRGLVQAQVNSARRFVDIQIGNFSRRLE
GMRRGGGSGGFSNSLRISASDHCIDTVTAWTNPICANSGGNAMGGGTRQPGGFGTNPHGG
PVTGGTMGGGLLGGGAIGAAPTGDGSDAAANANGSGGSAPSPLTIWAGGTIRWGDRDEKT
GRPSERFESEGVTFGTDYRFNPSFAAGIGIGLGRETTDVGRNGSQSEGEAKTLAIYGSHL
LGGGLYLDWLAGYQWLDFDLRRYVTLSGAMVNSSRSGRQWFGSVSAGADIESGNWRFTPY
ARIDAQRGTLNGYTENSGSVFDLSYRHQDVAFTSIGAGAKFDYRIAVENGFFLPRLRLEY
QRDIERDSEALVAYFDQLSGPFNAVPLTGYARSRFLMGLGVEMMIGDRTAVDVEYSRRDN
SGAGVDQGVLINLKQAF
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggcggttttgcgcgtggcgatggcgcgatggatggcgattgcggtgctggtc
gtgctgggcgcgctgttgccacagtcggcgagcgcgcagcatacgtcggcggaatgtccg
ccgcagagcgccaccgtaacgagcggcggcaccgtgacgatcaacatctccgattgcgaa
ttccctggaaacggggggctcggcgatatcgacggcgggtctttcggccccgcagacctg
gaggatcatggcaccgcaacgacaaggcgtacgggcggtgaatggtttctggattatagt
cacaacggcaccaccggcattggctcgaccgacgtctttgaacttgccgacggctcgttg
ggcggtaccggtgatattcggtttacgatcacgatcaatgcatcggcctcgccgatcacc
gttaccccgggttccctgccgactttgacggccggcgccgctttttcgcagactttgtcc
gcgagcggcggacttgctccctatagctacacgctgcaatcgggcgtcctgccgcctggc
ctgtcgctcacgacgggtggaatattgtcggggacgccaacgcagcgcggcgcctattcg
ttcagcgtgcgcgccacggacagcacgtcgccgacagcgcaattcgttgacaagggctac
accggatcggtgcagaaccccagcctgtcgctggcaacgtcgacggtcacgctggtgtcg
gggcaggcggcatcggcgcagctcgcgaccaatggcggcgtgtcgccgcatatctatgcg
accgaaccgccgggtacgcccatgccgttcggcctcagcctgtcgtcgggtggattgatc
actggaacgccgtcgagcaccggtacggcgacgatccagttgcgagtgaccgacgggagc
accggtctggctccatatttcgagctggaaacactgaccatcaatgtgattgcgccgcct
agcgtctcaatcgcggtagcgccagcatcggtatccgaagatggtgcgaccaacctggtc
tataccgtcacgcgcagcgccgggagcgccagtccactgattgtgaacctcgcgacgtca
gggatggcaaccagtgggaccgactataacggcggcgtggcgtccgtcacgattccggcc
aatgccacgaccgcgaccgtcaccatcgacccgacggtcgatggcacggtggaagccgat
gaaacggtcacactgaccgtcgcggcgggggctggctatgtggtcggcgtcccggcatcg
gcgaccggaaccatcctgaacgacgatttaccgaccgcttcgattacagtttcgccggca
agcgtcgtggaaaatgacgggccgaacctggtgtacacgattgcgctgagctccgcggcc
gtatcgccgctgacgatcaattacacgatcggcggggacgcgattaacggcgccgactat
ggaccgataggaacttctgtcgtcatcgccgcgggtgcaaccagtcagacgatcatcgtc
aatcccaacaacaacggcaccatcgaaccccacgagacggtgatcctcaccctggcggcg
ggcgccggttacacgatcggcgcgccgaacagcgccaccgggacgatactgaacgatgat
ttccccagcgtcgctgtcagcagcgtcacggcaaatgaaggcaacagcggcacgacgaat
atggcctttacggtcgacctgtcggcgcccgccgcgaccggcggcgtgactttcgatatc
gcgaccttcaacggtaccgccaccgcgggtcaggactatgtcgcgaacagccagaccggc
gtcgtgatccccgccggggcgacgtcggcgacgttcaccgtcgtcgtcaacggcgatatg
ctgaacgaggcgaacgagaccttcttcgtccgcatcgccaatgtgaccggcgcattcgtc
aacgggtcgcaaggcaccggcacgatcaccaatgacgatgcgcagcccacgctgtcgatc
agcagcccgtcgatcgtcgagggtaatatcggcacgcggacgctaaacttcgtcatggcg
ctcgacgcgccgagcggccttggcgtgaccgtcaatgtggcgaccgccaacggcaccgcc
accgcaggcagcgactatgttgcggcgagcggaggattctctttcgcgcccggcgaaacc
agcaagacgtttccggtgaccgtcaacagcgacaccgccccggaaggcgacgaaagtttc
accgtcaccatgtccggcgtgaccaacgcgacgatcggcgccaaccccggcacgggcacg
atcaccaacgacgatgtgccgctcgacatccagccggtcaacctgcccagcgggaccgtc
ggcatcctgtacagtgcgatcctgaccaccagtggcggcgtctcgccctacagctatgcc
gtgaccgcgggcgccattcccaccgggctgaccttcaatcccaacggcaccctttcgggc
acgccggtggccgcgggcaatttcagcttcaccatcaccgcaactgacagcagcggcgcg
cccggaccctttacggccagccgcgcctataccgtggcgatcgcggcgccgacgatcgtg
ctcgatccggtgacgctgccgaacgcgacctttggcgtggcatatagccagacgattacc
gccgacggatcgatcgcgccctatagctttgcggtgacctcgggatcgctgccccccggc
ttgacgctggcgcccggcggaacgctgtcgggcacgccgacgctcagcggcagctggggc
ttcacgatcaccgccaccgacgccactgcggcgcccggaccctatgccggtgcgcgcgcc
tattcgatcacggttgcccaagtgccgctggtcctgccgcctaccacgctcccggacggt
gcaaccgatgtcgcctattcggcgcagatcgcgtccgccaccggcggcgttgccccgtac
agctatgtcgtgacctcgggcgaactgccttacggcctgacgatgtcggcttcgggtgcg
atcaccgggaccccgacgaccgccaatctgttcagctttgtcgtcacggcgaccgacagt
gatggcggcgtggggccgcaggtcgtccagcaaagctattcgatcaacatcgtcaacacg
ccgcccgtcgttggagcggtcacggccaatgtggcttatggcgcggggctcaccccgatc
ccgctcagcatcaccggcaccgcaaactcggtcgcggtggtcacgccgccgacggctggg
cgcgcaatcgtcgaccggatgacgatcagctatattcccgacaccggctttgccgggacc
gacagcttcacttatcttgccagcaacaatggcgccaattcggcaccggccaccgtgacg
atcagcgtcgccaacccggcgatcacgatcaccgcgggcggaccgctgacggcgacggtc
ggggtgccttacggggaaacctttaccttcaatggcggaacccagcccttcaccaattat
caggtcaccggcctgccagccggggtgcaggtcgggagcagcggtgcgaatacggttgcg
atcatcggaacgccgaccagcgcgggcagcttcccgatcaccgtatcggcgaccgatgcc
tcgaccgggacggggccgttcagcacgagccaggtcttcacgcttgtcgtcgcagcaccg
acgctgagcatgacccccggggcagggacgctgaccgccgcctataacaccctcttctcg
caggcctttaccgccagcggcggggtcgggccgttcacttatgcgctcaccggcgcattg
cccgccgggctgaccttcgcgggcaacagcctcagcggaaccgcgaccgcgccgggcagc
tatccggtaaccgtcaccgcgaccgataccggatcgacaggcaccggatcgccgttcacc
atcgcgcagaattacatcatcaacgtgcccgcgccgacgatcatgatttcgccggaaagc
ctgccgaacggcaccgtcggtgccagctacagccagacagcgagcgcgtcgggtggggtt
gcggcctatggttatgcggtaagcgcgggcgcgctgccgcccggactgagcttgtcggct
ggcggcgtcatcgcgggtaccccgacggcgggtggcagcttcaatttcacgctgaccgca
accgacgccaatgcccagacgggcagccgcgcctataccttggccatcggcgcggcgctg
gtgtcgctgcccccgacgacgctcgcgggcgggcaggtcggctttgcctataacgcgccg
ctcaatcccgcgagcggcggcaccgcgccgtacagctatgtcgtgacgggcggcgcgttg
cccggcggggtgaccctgtcggcaggcgggacgctgtcgggtacgccgaccgcctttggc
accttcaatttcgcggtgaccgccaccgacagcagcacgggcagcgggccttatgcggcg
acgcagaattacacgctgctggtcgaacaaccggcgccgatcgccaaccccgtatcggca
acggtcgcttatggcagcaccgccaacccgatcgtgctcaacctgaccggcggcgcggca
gcgagcgttgcgatcgtgacctcgcccgcaaacgggaccgcggtcgccagcggcgccagc
atcacctacaccccgaacgctggttatgcgggcggcgacagcttcacctacaccgcgacc
aacgcgggcgggacgtcggcaccggcaacggtgacgatcgccgtcgccaatccggcgatc
gcgatcaccgcggacgggccgctgaccgcgacggtggggacggcctacagccagaccttc
accttcagcggcggtgcacagcccttctcgggttatcaggtcacgaacctgccgagcggg
ctggcgatcagcggcagcagcgcgaacagcgtgaccatcgcgggtacgccgacggcggcg
ggcagcttcgcgctcgcggtgtcgggcactgatgcctcgaccggcagcgggccgttcagc
accagccagaccttcaccctggctgtcagcgcgccgacgctcgcgctgacccccgcaatg
ggcagcttcaccgccacctatgcggcggcgtacagccaggcgctcaccgcgaccggcggg
gtcggtccctatagctacagcctgaccggcaatctgccggcgggcgttaccctcaattcg
tcgaccggactgctttccgggtcgccgacggcgtcggggagcttcagcttcgccgtgacc
gcgaccgataccggatcgaccggggcaggtgcgccgttcaccgtgcagggcaattacagc
ctgaccgtcgcggcgccgctggtcgcggtgactccgaccaccctcccggtcgcaaccgcc
ggcgccgcgtacagcgcgacgctgaccgccgcgggcggggtcgggccatatcgcttcgtg
ttgaacggcggcgcgctgcccgcagggctggcgctgtcgccaggcggcatcgtgtcggga
acgccgacggcggcaggcgcctttgccttcacggtcaacgtcaccgacgccaatggccag
acgggcgctgccagcctgacgctgaacgtcgccaattccgcgatcaccgtcacgccggtc
acgctgccgggcggcacgcagggggtcgcctatagccagcggatcaccgcagcgggcggt
atcgcgccgtacagcttcgcggtcagctcgggcgcgctgcctgcgggccttgcgatcaat
gcgaccacgggtgttatcgccgggacgccgaccggatcgggcgacgcgacctttgcgatc
accgtcaccgacagcaccggcggcacgccatcgaccgcgacgatcacttacactttgcgt
attgtggcgcggcccaacccggcgaacgatcccgaagtgcgcgggctggtccaggcacag
gtcaattcggcccgccgtttcgtcgatatccagatcggcaatttcagtcggcggctcgaa
ggaatgcgccgcggcggtggcagcggcgggttcagcaactcgctgcggatcagcgcatcg
gatcattgcatcgacacggtcaccgcatggaccaatccgatctgcgccaatagtggcggc
aacgccatgggcgggggcactcgtcaaccgggcggctttggcaccaacccgcacggcggt
ccggtgaccggcggcacgatgggcggcgggctgctcggcggcggggcgatcggcgcggcg
ccgactggcgacggcagcgacgcggcggccaacgccaatgggtcggggggcagcgcccca
tcgccgctcacgatctgggcgggcggcacgatccgctggggcgaccgtgacgaaaagacc
gggcgcccctctgaacgctttgaatcggaaggcgtgaccttcggtaccgactatcgcttc
aacccgtcctttgccgccggtatcggcatcggcctcgggcgtgagacaaccgatgtcggc
cgcaacgggtcgcagagcgaaggcgaggcgaaaacgctggcgatctacggcagccacctg
ctcggcggcgggctctatctcgactggctcgccggttatcagtggctcgatttcgacctc
cgccgctatgtcacgctgtcgggtgcgatggtcaactcgtcgcgcagcggccgccaatgg
ttcggctcggtttcggcgggcgccgacatcgaaagcggcaactggcgctttacgccctat
gcgcggatcgatgcgcagcgcggcacgctgaacggctataccgaaaacagcggttcggtg
ttcgacctctcctatcgccatcaggacgtggccttcacgtcgatcggggccggggccaag
ttcgattatcgcatcgcggtcgaaaacggcttcttcctgccgcggctgcggctggaatat
cagcgcgacatcgaacgcgacagcgaggcgttggtcgcctatttcgaccagctctcggga
ccgttcaacgctgtgccgctgaccggctatgcccgcagccggttcctgatggggctgggg
gtcgaaatgatgatcggcgatcggaccgcggtcgatgtcgaatattcgcggcgcgacaac
agcggggcgggggtcgatcagggcgtgttgatcaacctcaagcaggcgttctga
DBGET
integrated database retrieval system
