Sphingopyxis sp. EG6: SPYCW_2447
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Entry
SPYCW_2447 CDS
T10392
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
speg03016
]
SPYCW_2447
Enzymes [BR:
speg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SPYCW_2447
Transfer RNA biogenesis [BR:
speg03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SPYCW_2447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBB09431
UniProt:
A0A2Z5UEP3
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All DBs
Position
complement(2522210..2523556)
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AA seq
448 aa
AA seq
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MKSDSATTAKTFHVKSFGCQMNVYDGERMAEMLGAEGYVAAADGADADLVVLNTCHIREK
AAEKVYSDIGRLKRADGSTPTIAVAGCVAQAEGAEIARRAPSVDVVVGPQAYHRLPDLIA
RAARGEKAVDLDMPAMSKFGALPGRAGGQRPTAFLTVQEGCDKFCTYCVVPYTRGAEISR
PFADLVAEARALIAGGAREITLLGQNVNAWDGEDDRGRVIGLDGLIRELAREDGLERLRY
TTSHPNDMTDGLIAAHGEIDKLMPFLHLPVQAGSDRILAAMNRSHSSESYLRVIERVRAA
RPDIAISGDFIVGFPGESEEDFQSTLDLIHETRYAMAYSFKYSRRPGTPAATMADQIAEE
VMNDRLQRLQALLNEQQQAFNEATVGRTTRLLLERKGKLDGQLIGKTPWLQSAHVTAPGL
AIGDMIDVRIVSAGANSVAAEALMEPVA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgactccgccaccaccgccaagacctttcacgtcaaatccttcggttgccag
atgaacgtctatgacggcgagcgcatggccgagatgctgggcgccgaaggctatgtcgcc
gccgccgacggggccgacgccgacctggtcgtcctcaacacctgccatatccgcgagaag
gcggcggagaaagtctattcggacattggccggttgaagcgcgccgatggcagcacgccg
acgatcgccgtcgcgggctgcgtcgcgcaggccgaaggcgccgaaatcgcgcgccgtgcc
ccgagcgtcgatgttgtcgtcggcccgcaagcctatcaccgcctaccggatctgatcgcc
cgcgccgcgcgcggcgagaaggcggtcgatctcgacatgccggcgatgagcaagttcggt
gcgctgccgggacgcgccggcggccagcgcccgaccgccttcctgacggtgcaggaaggc
tgcgacaaattctgcacctattgcgtcgtgccctatacgcgcggcgccgagatcagtcgg
ccgttcgccgatctggtcgccgaggcgcgcgcgctaatcgcgggcggcgcgcgcgagatc
acgctgctcggccagaacgtcaatgcgtgggacggcgaggacgaccggggcagggtgatc
gggctcgacgggctgatccgcgaactggcgcgcgaggatgggctggaacgcctgcgctat
acgaccagccatcccaatgacatgactgacgggctgatcgccgcgcatggcgagatcgac
aagctgatgccgttcctccacctgccggtgcaggcgggcagcgaccgtatcctcgccgcg
atgaatcgcagccatagcagcgagagttatttgcgcgtcatcgaacgcgtccgcgcggcg
cgccccgacatcgcgatttcgggggatttcatcgtcggcttccccggcgagagcgaggaa
gatttccagtcgacgctcgatctgatccacgagacccgctacgcgatggcgtacagcttc
aaatattcgcggcgtcccggaacgcctgcggcgacgatggcggaccagatcgccgaagag
gtgatgaacgatcgcctccagcggttgcaggcgctgctcaatgaacagcagcaggcgttc
aacgaggcgaccgtcggacgcacgacgcgcctgctcctcgaacgcaagggcaagctcgat
ggacagctgatcggcaagacgccgtggctccagtcggcgcatgtcaccgcaccgggcctg
gcgatcggcgacatgatcgatgtgcggatcgtgtcggcgggcgccaacagcgtggcggcc
gaagcccttatggagcccgtcgcctag
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