KEGG   Sphingopyxis sp. EG6: SPYCW_2689
Entry
SPYCW_2689        CDS       T10392                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
speg  Sphingopyxis sp. EG6
Pathway
speg00300  Lysine biosynthesis
speg00470  D-Amino acid metabolism
speg01100  Metabolic pathways
speg01110  Biosynthesis of secondary metabolites
speg01120  Microbial metabolism in diverse environments
speg01230  Biosynthesis of amino acids
Module
speg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:speg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SPYCW_2689
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SPYCW_2689
Enzymes [BR:speg01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SPYCW_2689
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BBB09673
UniProt: A0A2Z5UFE7
LinkDB
Position
complement(2769759..2771018)
AA seq 419 aa
MDQFALRDGVLHAEDIPLPRLAEEIGTPVYVYSRAMLEAHAQEFRDALKDVPKKHLAFAI
KSNPNLGVLRVLARQGYGADVVSGGELERAIAAGMAPDDIVFSGVGKTRAELALGLDRGI
GQFNIEHEAEGVALAEIALKKEMTARAVLRVNPDVDAGTHAKISTGKADNKFGVGIDVAP
AMFDRLAALPGLQMRGIAVHIGSQLTSLDPLEAAFERLGRLIADLRAAGHSITHVDLGGG
LGVSYKPEDNPPSMADYGAMVARVTRDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGATN
PFVIVDAAMNDLARPALYDAYHDFVAVKPTGAKMTASIVGPVCETGDTFARDRVTDAVEP
GDLAVFRTAGAYGATMASTYNSRSLVPEVLVDGDRYVKVADRIAASTIMAAERVPDWID
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggatcaatttgcccttcgtgacggcgtcctccacgccgaagatattccgctgccgcgc
cttgccgaagaaatcggcacccccgtttatgtctattcgcgcgcgatgctcgaagcgcat
gcgcaggaattccgcgatgcgctgaaggacgtgccaaagaagcacctcgcctttgcgatc
aagagcaaccccaaccttggcgtactgcgcgtgctggcgcggcagggttatggcgccgac
gtcgtctcgggcggcgagctcgaacgcgcgattgccgcgggcatggcgcccgacgacatc
gtcttttcaggcgtgggcaagacccgcgccgagctcgcgttgggcctcgatcgcggcatc
ggccagttcaacatcgaacatgaggcggaaggcgtcgcgctcgccgaaatcgcgctcaag
aaggaaatgaccgcgcgcgccgtgctgcgcgtcaatcccgacgtcgatgcgggcacccat
gcgaagatttcgaccggcaaggccgacaacaagttcggcgtcggtatcgacgtcgccccc
gcgatgttcgaccgcctcgccgcgcttcccggcctccagatgcgcggcatcgcggtccat
atcggcagccagctgaccagcctcgacccgctcgaggccgcgttcgagcggctcggtcgc
ctgatcgccgacctgcgcgccgcgggacacagcatcacccatgtcgatctcggcggcggg
ctcggcgtgtcgtacaagcccgaggataatccgcccagcatggccgattatggcgcgatg
gtcgcgcgcgtgacccgggactgggacgtcaccttgatgttcgagcccggccgcgtcatc
gcgggcaacaccggggtgctgctgaccgaagttctctgggtcaagcccggcgcgaccaac
ccctttgtcatcgtcgacgcagcgatgaacgacctcgcgcgccccgcgctctacgatgcc
tatcatgatttcgtcgcggtgaagccgaccggcgccaagatgaccgcctcgatcgtcggc
ccggtgtgcgaaaccggcgacaccttcgcgcgcgaccgcgtgaccgatgcggtcgaaccc
ggcgacctcgcggtgttccgcactgcgggcgcctatggcgcgacgatggcttcgacctac
aacagccgcagcctggtccccgaagtgctggtcgatggcgatcgctacgtcaaagtcgcc
gaccgcatcgccgccagcacgatcatggcggcggaacgcgtgccggactggatcgattga

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