Sphingopyxis sp. EG6: SPYCW_2806
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Entry
SPYCW_2806 CDS
T10392
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg02024
Quorum sensing
speg03060
Protein export
speg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SPYCW_2806 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SPYCW_2806 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPYCW_2806 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
speg02044
]
SPYCW_2806 (ffh)
Enzymes [BR:
speg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SPYCW_2806 (ffh)
Secretion system [BR:
speg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SPYCW_2806 (ffh)
Eukaryotic Sec-SRP protein
SPYCW_2806 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
ABC_tran
AAA_33
AAA_16
AAA_19
ResIII
AAA
AAA_17
AAA_31
YqeC
DnaB_C
AAA_14
TctA
Thymidylate_kin
cobW
APS_kinase
AAA_24
AAA_28
NACHT
ArsA_ATPase
NPHP3_N
GTP_EFTU
NB-ARC
6PF2K
AAA_7
TsaE
nSTAND3
KTI12
AAA_5
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BBB09790
UniProt:
A0A2Z5UG72
LinkDB
All DBs
Position
complement(2888175..2889632)
Genome browser
AA seq
485 aa
AA seq
DB search
MFDSLSNRLGDVFGKLRGRGALTEADVRAAMREVRIALLEADVALPVVRSFVDQVTDLAI
GQNVLRSVTPGQQVVKIVSDALTEMLGSETAELDLNVAPPAVIMMVGLQGSGKTTTTAKI
AKRLKDKERKKVLMASLDVNRPAAQEQLAVLGQQIDVATLPIVAGQQPVEIAQRAMQAAK
LQGFDVLMLDTAGRLHVDQQLMDEMQAVSRTANPAETLLVVDSLTGQDAVQVAQRFTDQV
PLTGVVLTRMDGDARGGAALSMRAVTGKPIKFAGTGEKLDGLELFQPSRIAGRILGMGDV
VSLVERAAETIQAEEAEAMAAKMAKGQFDLNDLRTQLNQMRRMGGLGALAGMIPGIKKAQ
AQMAAGGADDKMLIHFDAIMGSMTPKERAKPEILTAKRKIRIANGSGTTVQQVNKVLKMH
QEMASAMKKIRKMGGLKGLGALFGKGGGIPGMGGPGGLGGGGGLPGLGGGGSIPPELANL
MNKKK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacagtctgagcaatcggcttggcgatgttttcggaaagctccgcggtcgcggc
gcgctgaccgaggccgacgtgcgcgccgcgatgcgcgaggtgcgaatcgccctgctcgag
gctgacgtcgcgttgcctgtcgtgcgcagcttcgtcgatcaggtcaccgacctcgcgatc
ggtcagaacgtcctgcgctcggtcaccccggggcagcaggtggtcaagatcgtcagcgat
gcgctgaccgaaatgctcggctccgagactgccgagctcgacctcaacgtcgcgccgccc
gcggtcatcatgatggtcggcctgcaaggctcgggcaagaccacgaccaccgcgaagatc
gcaaagcggttgaaggacaaggagcgcaagaaggtgctgatggcgtcgctcgacgtcaat
cgccccgccgcgcaggaacagctcgccgtgctcggccagcagatcgacgtcgcgaccctc
ccgatcgtcgcaggccagcagccggtcgaaatcgcccagcgcgccatgcaggcggcgaag
ctgcagggcttcgacgtgctgatgctcgacaccgcgggccgcctccacgtcgaccagcag
ctgatggacgaaatgcaggcggtgtcgcgcaccgcgaaccccgccgaaacgctgctcgtc
gtcgacagcctgaccggccaggacgcggtgcaggtcgcgcagcgctttaccgaccaggtg
ccgctcaccggcgtcgtgctcacgcgtatggacggcgacgcgcgcggcggtgcggcgctg
tcgatgcgcgcggttaccggcaagccgatcaagttcgcgggtacgggcgagaagctcgac
gggctcgaactcttccagccgtcgcgcatcgcgggccgcatcctcggcatgggcgacgtc
gtcagcctcgtcgaacgcgccgccgaaacgatccaggccgaagaggccgaggcgatggcg
gcgaagatggccaagggccagttcgacctcaacgacctccgcacccagctcaatcagatg
cgccgcatgggcggcctcggcgcgctcgctggcatgatccccggcatcaagaaggcgcag
gcccagatggctgcgggcggcgccgacgacaagatgctcattcatttcgacgcgatcatg
gggtcgatgacccccaaggaacgcgcgaagcccgaaatcctgaccgcgaagcgcaagatc
cgtatcgccaacgggtcggggaccaccgtgcaacaggtcaacaaggtgctgaagatgcat
caggaaatggccagcgcgatgaagaagatccgcaagatgggcggcctcaaggggctcggc
gcgctgttcggcaagggcggcggcattcccggcatgggcggcccaggcggtttgggtggc
ggcggcggcctccccggccttggtggaggcggatcgatcccgcccgaactcgccaatttg
atgaataaaaagaagtaa
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