Sphingopyxis sp. EG6: SPYCW_3014
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Entry
SPYCW_3014 CDS
T10392
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPYCW_3014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
speg03400
]
SPYCW_3014
Enzymes [BR:
speg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SPYCW_3014
DNA repair and recombination proteins [BR:
speg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPYCW_3014
Prokaryotic type
SPYCW_3014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF5995
Motif
Other DBs
NCBI-ProteinID:
BBB09998
UniProt:
A0A2Z5UG34
LinkDB
All DBs
Position
complement(3085720..3086424)
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AA seq
234 aa
AA seq
DB search
MADVKLHPDWLARIGGEFAQPYMAALKQFLEGERAKGKAIFPRPRDWFAALDATPPQDVR
VVILGQDPYHGPGQAHGLCFSVQPGVRVPPSLVNIYKEMESDLGIARARHGYLKSWASQG
VLLLNNCLTVESGMAASHQGKGWEKFTDAVVAAVAADPAPKVFILWGSHAQKKAANVAGL
GSGTRHLVLRSPHPSPLSAHNGFFGSRPFSQANDFLAAQGRGTIDWRLPDEPGA
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcaaattgcatcccgactggctcgcccgcatcggcggcgagtttgcgcag
ccctatatggcggcgctcaagcaatttttggagggcgagcgcgcgaaggggaaggcgatt
tttccgcggccgcgcgactggttcgcggcgctcgatgcgacgccgccgcaggatgtccgc
gtcgtgatattggggcaggacccctatcacgggccggggcaggcgcatgggctctgcttt
tcggtgcagccgggggtgcgggtaccgccgagcctcgtcaacatctacaaggaaatggaa
agcgaccttggcatcgcgcgtgcgcgccacggctatctcaaatcctgggcaagccaaggc
gtgctgctgctcaacaattgcctgacggtcgaaagcggcatggcggcgtcgcatcagggc
aaggggtgggagaaattcaccgacgcggtcgtcgcggcggtcgccgccgatccggcgccg
aaggtgttcattctgtggggcagccatgcgcagaagaaggcggccaacgtcgcgggcttg
ggttcgggtacccggcacctggtgctgcgttcgccgcacccctcgcccttgtcggcgcac
aacggctttttcgggtcgcggccgttcagtcaggccaatgattttctggcggcgcaggga
cgcgggacgatcgactggcgcctgccggacgaacccggcgcatga
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integrated database retrieval system
