Sphingopyxis sp. EG6: SPYCW_3034
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Entry
SPYCW_3034 CDS
T10392
Symbol
purD
Name
(GenBank) phosphoribosylamine-glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg00230
Purine metabolism
speg01100
Metabolic pathways
speg01110
Biosynthesis of secondary metabolites
Module
speg_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SPYCW_3034 (purD)
Enzymes [BR:
speg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
SPYCW_3034 (purD)
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GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATP-grasp_5
ATP-grasp_4
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
BBB10018
UniProt:
A0A2Z5UG50
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Position
3122156..3123433
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AA seq
425 aa
AA seq
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MNILLVGSGGREHALSWQLAQSPSCAKLYAAPGNPGIEAHAECVGIAADDLDGLVAFCTA
HAIDFVVVGPEAPLVAGLADRLRARGIATFGPGAAAAQLEGSKGFTKDLCARAAIPTAGY
RRCTSAAEALAALGDFAIPVVIKADGLAAGKGVIIAETRADAEAAVDDMFDGAFGGAGAE
VVIEEYMTGEEASFFALSDGTNVMAFGSAQDHKRVGDGDVGPNTGGMGAYSPAPVLTADL
EAQVMDRIIRPTVATLAAEGTPYVGVLFAGLMLTDRGPKLIEYNARFGDPECQVLMMRYA
GDLAALLYAASTGALADAPPPAFASDYALTVVMAANGYPATPEKGGVIHGIADAESGGVR
VFHAGTARDGDTIIAAGGRVLNVTATGRTVTEAQARAYAAVDKLDFASGFCRRDIGWREV
AREAR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcctgctggtcggatcgggtggccgcgaacatgcgctcagctggcagttggca
caatcgccaagctgcgccaagctctatgccgcacccggcaaccccggcatcgaagcccat
gccgaatgcgtcggcatcgccgccgacgacctcgacgggcttgtcgccttttgcaccgca
cacgcgatcgacttcgtcgtcgtcggccccgaagcgccgctcgtcgcggggctcgccgac
cggctgcgcgcgcgcggcatcgcgaccttcggccccggcgccgccgcggcgcagcttgag
ggcagcaagggctttaccaaggatctgtgcgcccgcgccgcgatcccgacggcaggctat
cggcgctgcacctccgccgcagaggcgctggcagcgctcggcgacttcgccatacccgtc
gtcatcaaggccgacggcctcgccgcgggcaagggcgtgatcatcgccgaaacgcgcgcc
gatgccgaagccgcggtcgacgacatgttcgatggtgcctttggcggcgcgggcgccgaa
gtggtgatcgaggaatatatgaccggcgaggaagcgagcttctttgccctgtccgacggc
accaatgtgatggcgttcggcagcgcgcaggatcacaagcgcgtcggcgacggcgatgtc
ggccccaacaccggcggcatgggcgcctatagccccgcccccgtgctcaccgccgacctc
gaagcgcaggtgatggaccgcatcatccgcccgacggtcgctaccctcgccgccgagggg
acgccttatgtgggcgtgctgttcgcggggctgatgctcaccgacagggggccgaagctg
atcgaatataatgcgcgtttcggggatcccgaatgccaggtgctgatgatgcgctacgcg
ggcgaccttgccgccctgctttacgccgcatcgaccggcgcgctggcggatgcgccgccc
cccgccttcgccagcgactatgcgctgacggtggtgatggccgcgaatggctatccggcg
acccccgaaaagggcggcgtgatccatggcatcgccgatgccgaaagcggcggcgtgcgc
gtatttcacgcgggaaccgcgcgcgacggcgataccatcattgccgcgggcgggcgtgtg
ctcaatgtcaccgcgacggggcgcaccgttaccgaggcgcaggcgcgtgcctatgccgcg
gtcgacaagctcgatttcgccagcggcttctgccgccgcgacattggctggcgcgaagtc
gcgcgcgaggcgcgctga
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