Sphingopyxis sp. EG6: SPYCW_3199
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Entry
SPYCW_3199 CDS
T10392
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg00071
Fatty acid degradation
speg00310
Lysine degradation
speg00362
Benzoate degradation
speg00380
Tryptophan metabolism
speg01100
Metabolic pathways
speg01110
Biosynthesis of secondary metabolites
speg01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
SPYCW_3199 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
SPYCW_3199 (gcdH)
00380 Tryptophan metabolism
SPYCW_3199 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SPYCW_3199 (gcdH)
Enzymes [BR:
speg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
SPYCW_3199 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Motif
Other DBs
NCBI-ProteinID:
BBB10183
UniProt:
A0A2Z5UGR5
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Position
complement(3296990..3298195)
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AA seq
401 aa
AA seq
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MALADPQRIEALDPLDPLQLDAELSEEERMVRDTARSYATDALLPRVTSAFLDERFDREI
MSEMGALGLLGATIDPEYGGAGLNYVSYGLIAREVERVDSGYRSACSVQSSLVIHPINAY
GSEEQKRKFLPGLTSGELVGCFGLTEPDAGSDPGGMRTRAEKIEGGYRLKGAKMWITNSP
IADVFVVWAKSEAHGGAIRGFVLEKGMKGLSAPKIEGKVSLRASVTGEIVMDSVEVGEDA
LLPHVSGLKGPFGCLNRARYGIGWGAMGAAEFCYEAARNYTGERQQFGRPLAANQIVQLK
LANMLTEITLGLHAALRVGRLIDEGRLIPDAISFLKRNNCGKALDIARVARDMHGGNGIS
ADYHVIRHAVNLETVNTYEGTHDVHALILGRAITGISAFGG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggccctcgccgatccgcagcgcatcgaagcgctcgaccccctcgatcctcttcagctc
gacgccgagctcagcgaagaggaacggatggtgcgcgatacggcgcgttcctacgcgacc
gatgcgttgctgccgcgcgtcacttcggcgtttctcgacgagcggttcgaccgcgagatc
atgtccgaaatgggcgcgctgggcctgcttggcgcgacgatcgatcccgaatatggcggc
gccgggctgaattatgtcagctacgggctgatcgcgcgcgaggtcgagcgcgtcgattcg
ggctatcgttcggcctgttcggtgcagagcagcctcgtgatccatccgatcaacgcctac
ggcagcgaggagcagaagcggaaattcttgcccggactgacctcgggcgaactcgtcggc
tgtttcgggctgaccgagcccgatgcgggcagcgatcctggcgggatgcggacgcgcgcc
gaaaagatcgaaggcggctatcgcctgaagggcgcaaagatgtggatcaccaactcgccg
atcgccgacgtgttcgtcgtgtgggcgaagtcggaagcgcatggcggcgcgatccgcggc
tttgtgctcgaaaagggcatgaaaggcctctcggcgccgaagattgagggcaaggtgagc
ctgcgcgcgtcggtgaccggcgagatcgtcatggattcggtcgaggtcggcgaagacgcg
ctgctgccgcacgtatcggggctcaagggtcccttcggttgcctcaaccgggcgcgttac
ggcatcggctggggcgcgatgggcgcggccgaattctgttacgaggcggcgcggaactat
accggcgagcgccagcagttcggacgcccgctcgcggcgaaccagatcgtccagttgaag
ctcgccaatatgctcaccgaaatcacgctcgggctgcacgcggcgctgcgcgtcgggcgg
ttgatcgacgaagggcgcctgattcccgatgcgatcagcttcctgaagcgcaacaattgc
ggcaaggcgctcgatatcgcccgcgtcgcgcgcgacatgcacggcggcaacgggatttcg
gccgactatcatgtcatccgtcacgcggtgaacctggaaacggtgaacacctatgaaggg
acgcacgacgtccatgcgctgatcctgggccgcgcgatcaccggcatctccgcctttggc
ggctga
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