Sphingopyxis sp. EG6: SPYCW_3241
Help
Entry
SPYCW_3241 CDS
T10392
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg03030
DNA replication
speg03430
Mismatch repair
speg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPYCW_3241
03430 Mismatch repair
SPYCW_3241
03440 Homologous recombination
SPYCW_3241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
speg03032
]
SPYCW_3241
03400 DNA repair and recombination proteins [BR:
speg03400
]
SPYCW_3241
Enzymes [BR:
speg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPYCW_3241
DNA replication proteins [BR:
speg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPYCW_3241
DNA repair and recombination proteins [BR:
speg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPYCW_3241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
DUF3131
Motif
Other DBs
NCBI-ProteinID:
BBB10225
LinkDB
All DBs
Position
3339629..3340330
Genome browser
AA seq
233 aa
AA seq
DB search
MREIIFDTETTGFDPKTGDRLVEIGCIELVDRRETGQTFHAYFNPERDMPAAAEAVHGLS
IQFLSDKPLFATRVDDLLEFLGDAPLVAHNAAFDFGFVNAELARAGRPALDMARMCCTVQ
MARKLHPGAKHSLDALCTRYGIDRSHRVKHGALLDAELLAHLYIEMTGGRQIGLGLAASA
TNVPTLAAAAPAVPRGGDRPFREPRPHMASAADLARHAEFVAGLNQPLWLDTV
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagattatcttcgatacggaaaccacgggattcgatcccaagaccggggacagg
ctggtcgaaatcgggtgcatcgaactggtcgaccgccgcgaaaccggccagaccttccac
gcctatttcaaccccgaacgcgacatgcccgccgccgccgaagcggtgcacggcctgtcg
atccagttcctgtcggacaagccgttgttcgcaacccgcgtcgacgatctgctcgaattt
ctcggcgacgcgccgctggtcgcgcacaatgccgcgttcgacttcggtttcgtcaacgcc
gaactcgcgcgcgcgggccgtcccgcgctcgacatggcgcggatgtgctgcacggtccag
atggcgcgcaagctccatccgggcgccaagcacagcctcgacgcgctctgcacgcgctac
ggcatcgaccgcagccaccgcgtcaagcatggcgcactgctcgatgcggaactgctcgcg
cacctctacatcgaaatgaccggcggccggcagatcgggctgggactcgcggcgtcggcg
accaacgtcccgacgctcgccgccgcggcccctgcggtaccgcgcggcggcgatcgtccg
ttccgcgaaccccgaccccatatggcatcggccgccgatctggcacgccatgccgaattt
gtcgcagggctgaaccagccgctgtggctcgatacggtgtga
DBGET
integrated database retrieval system
