Sphingopyxis sp. EG6: SPYCW_3362
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Entry
SPYCW_3362 CDS
T10392
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
speg02000
]
SPYCW_3362
Transporters [BR:
speg02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCW_3362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Porin_2
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BBB10346
LinkDB
All DBs
Position
complement(3450244..3452952)
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AA seq
902 aa
AA seq
DB search
MRTTALGVSIAMAVVAAPAFAQDAPAAETVDDSDDTPIIVTAQGRSQLLSDVPVAISAVN
AETLQNSGANDIRQLNQVAPSLLVSSTGSEANGSARIRGIGTVGDNPGLESSVPVFIDGV
YRSRSGIGLNELGEIDRVEVQRGPQGTLGGRNSSAGLISIYSKKPEFDFGANGEITYGNY
DFLRFTGSVTGPLSETIAARLDGVYVQRDGFYRDTTNNTDVNDRDRYFLRGQILFEPTDA
LSIRLIADYTYRDEKCCAATYVDNSVNPYIGDLNNPSTPLTPLQTNGNNIINVLRDLGQP
LSAFNQGYGRAISVSPGRSFEGQTKDYGFSGQIDYDFGGATLTSITAYREYRSSQASDTD
YGAVDILYRAPSDDAYRQFHTFTQELRLQGEAFDGTLDWLVGGFYANEKLTVRDNLRFGS
QYGRFATCRIISGGGLAGLYSPTSPGCLAARPAAFGAASPAIYAAFDVLDSINDRGTTND
RYFQEGNNWALFTHNIVHITDRLDLTLGLRYTNDKKKFNATFGNDNTGCTTVQGLVGGFT
GVAALAAVSQGLIGLACQGNSTAELNGVSINDDRSEDEWTGTAILSYKPTDDLLVYGSFA
RGYKAGGFNLDRSALKPPVVSFASVGGAQALVGNLQFDPELVDSYEIGAKYSTGPFSLSL
SAFRSDFSNFQLNTFNGTVFLVQTINGCDNLVGGPGADTDLSNATGTCATDDVTYGVRTQ
GFELEAQLVPARNFRVAAGLTYARTKYRSDLVGTKNGTPLDSALRKLPGNNLSNAPELVA
TGSVTWTPEIGSSGLTGLVYIDGRMTSDYNTGSDLFPQKAQDGYALFNARLGLRGPDEKW
GVELWAQNIFNKNYAQVAFNSPFQAGTTAAPFVDPQYPGGRQIFSQFLAEPRTYGVTLRG
KF
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccacggcgctgggtgtgtcgatcgccatggccgtcgtcgccgcgcccgccttt
gcgcaggacgcccccgccgccgaaaccgtcgatgacagcgacgacacgccgatcatcgtg
accgcgcagggccgctcgcagctgttgtccgacgtgccggtcgcgatttcggcggtgaac
gccgaaacgctgcagaacagcggcgccaacgacattcgccagctgaaccaggtcgccccg
tcgctgctcgtctcgtcgaccgggtcggaagccaatggttcggcgcgtattcgcggcatc
ggcaccgtcggcgacaaccccgggctcgaaagctcggttcccgtgttcatcgacggcgtt
taccggtcgcgttcggggatcggcctcaacgaacttggcgaaatcgaccgcgtcgaagtg
cagcgcgggccgcagggcacgctgggcggccgcaactcgtcggcaggcctgatcagcatt
tattcgaaaaagcccgagtttgatttcggcgccaacggcgaaatcacctatggcaactac
gacttcctgcgctttaccggtagcgtcaccggcccgctcagcgaaacgatcgcggcgcgc
ctcgacggcgtctatgtccagcgcgacggtttctatcgcgacacgacgaacaacaccgac
gtcaacgaccgcgaccgttatttcctgcgcggccagatcctgttcgaaccgaccgacgca
ctgtcgatccggctgatcgccgattatacctatcgcgacgaaaaatgctgcgccgcgacc
tatgtcgacaacagcgtcaatccgtatatcggcgacctcaacaacccgtcgacgccgctg
acgccgctgcagaccaacggcaacaacatcatcaatgtgctgcgcgacctggggcagccg
ctgtcggcgttcaatcagggctatggccgcgcgatctcggtcagcccggggcgcagcttc
gagggccagaccaaggattacggtttctccggccagatcgactatgatttcggcggcgcg
acgctgacctcgatcaccgcgtaccgcgaatatcgttcgagccaggcatcggacaccgac
tatggcgcagtcgatattctctatcgcgccccgagcgatgacgcctatcgccagttccac
accttcacgcaggaactgcgcctgcagggtgaggcgttcgacggaacgctcgactggctg
gtcggcggcttttacgccaacgaaaagctgacggtgcgcgacaatctgcgttttgggagc
cagtacgggcgcttcgccacttgccgcatcatttcgggcggcggtcttgccgggctctat
tcgccaacgtcgcccggctgtctcgccgcgcgtccggcagcctttggcgcggcgtcgccg
gcgatctacgccgcgttcgacgttctcgacagcatcaacgaccgcggcacgaccaacgac
cgttatttccaggaaggcaataactgggcgctgttcacgcataatatcgtgcacatcacc
gatcgcctcgatctgacgctggggctgcgctacaccaacgacaagaagaagtttaacgcc
accttcggcaacgacaacaccggctgtaccacggtgcaagggcttgtcggcggcttcacg
ggcgttgcagcgctggcggccgtgtcgcaaggactgatcgggctggcctgccagggcaat
tcgaccgcagagcttaacggcgtgtcgatcaacgacgatcgcagcgaagacgaatggacc
ggcacggcgatcctgtcgtacaagccgaccgacgatctgctcgtctatggcagctttgcg
cgcggttataaggcgggtggcttcaaccttgaccgctcggcgctgaagccgccggtcgtt
tccttcgcatcggtcggcggcgcacaggcgctggtcggcaatctccagttcgatcccgaa
ctggtcgacagctatgaaatcggtgccaaatattcgacgggcccgttcagcttgagcctg
tcggccttccggtcggatttcagcaatttccagctgaacaccttcaacggcaccgtgttc
ctggtccagacgatcaacggctgtgacaatctggtcggcggccccggcgccgataccgac
ctcagcaacgccaccggcacctgtgcgaccgacgatgtcacctacggcgtccgcacgcag
gggttcgagctggaggcgcagctggtcccggcgcgcaacttccgcgtcgcggcgggcctg
acctatgctcgcaccaaatatcgcagcgacctggtcggcaccaaaaatggcacgccgctc
gattcggcgctgcgcaagctgcccggcaacaatctgtcgaacgcgcccgaactggtcgcg
accggcagcgtgacctggacgcccgaaatcgggagcagcgggctgaccggcctggtctat
atcgatggccgcatgaccagcgattataacaccgggtccgacctgttcccgcaaaaggcg
caggatggctatgcgctgttcaacgcgcgccttggcctgcgcggccccgacgagaagtgg
ggcgtcgaattgtgggcgcagaatatcttcaacaaaaactacgcccaggtcgcgttcaac
tcgccgttccaggcggggacgacggcagcaccgttcgtcgacccgcaatatccgggcggc
cgccagatcttctcgcagttcctggccgaaccgcggacctatggcgtgacgctgcgcggc
aagttctga
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