Sphingopyxis sp. EG6: SPYCW_3516
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Entry
SPYCW_3516 CDS
T10392
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
speg02000
]
SPYCW_3516
Transporters [BR:
speg02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCW_3516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
MtrB_PioB
BBP2_2
Motif
Other DBs
NCBI-ProteinID:
BBB10500
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Position
3625706..3628177
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AA seq
823 aa
AA seq
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MRKLLRTSGSIIAVLAGMSAAAAFAQDNAKEAPGPGASQGEIVVTGTRRNDLKAADSAQP
IDIITGAELLEKGTADMNDLLRTEVPSLNVQRLVSNDGAVFTRPFSLRGLPPDQTLVLVN
GKRRHRGATVQFTNVPYIRGSQGPDLSAIPSIAIGQLEVLRDGASALYGSDAIAGVLNFG
LRRDREGGLLIARYGQFYKGDGEDFLVQGNVGLPFTDAGFVNISGEYVNASTTSRGIQRP
DAQALIDAGVQDVPVPAQRWGNPESEAARIFVNAGIELSDEMEFYTFGNYSWSRGTTAFF
YRNPDASFISTSIPLTNTPGGQRFSFRQLFPGGFTPDFGATVTDAALAAGLKGEFSSGLT
YDLSASYGQNHASYRIENTVNPSLGLASPTSFKPGQLEQRELAFNLDLTYPIAIGTSDPL
TLAGGLEYRRETYEITAGDIASWQVGPFASVIDPDTGNRVGLPVGSNGFPGFSPIQAGEF
ARSNWAAYTSLEGNLTDALQFGLAGRYENYSDFGSKFTWKINGRYDFSDVFAVRGSVNTG
FRAPTPGQSNASQVQTNIDSITGAPLTAGIIAPNNPVAQFFGATPLRPENSFNVAGGIVV
KPSNRITFTLDYFNIKVEDRIAVSGNFNLTPAQRAQLAALGIPGGDSFQQVSFFTNSFDS
RTQGVDAVLTVGFDLGDGKATLGLNGNYTKTDVIKASPVITADRERLLELEGFVPKWKGN
ASFTYAGERFGFVARANYYGKWTDYGAAPAADQTGGAELLVDLELSYKVSDMLKLAVGGE
NIFDNYPDVEARQSQINNGIRYLRFAPTGFNGGFWYVRATASF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattgcttcgcacgagtggctcgattatcgccgtcctggcaggcatgtcggcc
gccgccgccttcgcgcaggataacgccaaagaggcgccggggccaggcgcgtcgcagggc
gaaatcgtcgtgacgggtacgcggcggaacgatctcaaggcggccgattccgctcagccg
atcgacatcatcaccggtgccgaactgctcgaaaagggcacggccgacatgaatgatctc
ctgcgcaccgaggtcccgtcgctcaatgtccagcgcctcgtcagcaacgacggcgccgtt
tttacccggcctttctcgctgcgcggcctgccgccggaccagacgctggtgctcgtgaat
ggcaagcggcgccatcgcggcgcgacggtccagttcaccaatgttccctatatccgggga
tcgcagggacccgatctttcggcgatcccgtcgatcgcgatcggccagctcgaggttctg
cgtgacggcgcgtcggcgctctatggatcggatgcgatcgccggcgtcctcaatttcggt
ctgcgccgcgaccgcgaaggcggattgctgatcgcccgctatggccaattctataagggc
gacggcgaggatttcctcgtccagggcaatgtcgggcttcccttcaccgacgccggtttc
gtcaacatcagcggcgaatatgtgaacgccagcacgacgtcgcgcggcattcagcgtccc
gacgcgcaggcgctcatcgatgccggcgttcaggatgtcccggtcccggcgcagcgctgg
ggaaatcccgaatccgaggcggcgcgcatcttcgtcaatgccggcatcgaactgtcggac
gagatggaattctacaccttcggcaactatagctggagccgcggcacgacggccttcttt
taccgcaaccccgatgccagcttcatttccacctcgattccgctcaccaatacgcccgga
ggacagcggttcagcttccgccagctctttcccggcggtttcaccccggatttcggtgcc
acggtgaccgatgcggcgctggcggccggcctcaagggcgaattctcctcgggcctgacc
tatgacctcagcgcttcctatggtcagaaccatgcttcctaccggatcgaaaatacggtc
aatccgtcgcttggcctcgcgtcgccgacctccttcaagccggggcagctcgagcagcgc
gaactcgctttcaatctcgatctcacttaccccatcgcgatcggcacctccgatccgctg
acgcttgcaggcggtctcgagtatcggcgcgagacatatgagatcacggccggcgacatc
gcatcatggcaggttggtcctttcgcgtcggtcatcgatcccgataccggaaaccgcgtc
ggactgccggtcggctcgaacggcttcccgggcttcagtcccatccaggcgggcgagttc
gcgcgcagcaactgggccgcctatacgtcgctcgaaggcaatctcaccgacgcgctccag
ttcggccttgccggccgctacgagaattactcggacttcggctcgaaattcacctggaag
atcaacgggcgatatgatttctcggacgtcttcgcggtgcgcggatcggtcaacaccggc
tttcgggcgccgacgccgggccagtcgaacgcctcgcaggtccagaccaacatcgactcg
ataaccggggcgccgctgaccgcaggcattatcgcgcccaacaatccggtggcgcaattc
ttcggcgcgacgccgcttcggcccgagaattcgttcaacgtcgccggcggcatcgtggtg
aagccctccaatcgcatcaccttcacgctcgactatttcaacatcaaggtcgaagaccgg
atcgccgtatcgggcaatttcaatctcaccccggcgcagcgtgcgcagctcgcggcgctt
ggcattcccggtggggattccttccagcaggtgagcttcttcaccaattccttcgacagc
cgcacccagggcgtcgatgcggtgctcaccgtgggcttcgacctcggcgacggcaaggcc
acgctcggcctcaacggcaactataccaaaaccgatgtcatcaaggcctcgccggtgatc
actgcggaccgcgagcggctgctcgaactcgagggcttcgttccgaagtggaagggcaat
gcgtccttcacttatgcgggcgagcgcttcggcttcgtcgcgcgcgcgaactattatggc
aaatggaccgactatggcgccgcaccggctgccgaccagacgggcggcgccgaactgctg
gtcgatctcgagctgtcctacaaggttagcgacatgctcaagctcgcggtcggcggcgag
aatatcttcgacaattaccccgacgtcgaggcgcggcaatcccagatcaacaacgggatc
cgatatctccgcttcgcgccgacggggttcaacgggggcttctggtacgtccgcgcgacc
gcctccttctga
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