Sphingopyxis sp. EG6: SPYCW_3551
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Entry
SPYCW_3551 CDS
T10392
Name
(GenBank) histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
speg Sphingopyxis sp. EG6
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
speg03032
]
SPYCW_3551
03036 Chromosome and associated proteins [BR:
speg03036
]
SPYCW_3551
03400 DNA repair and recombination proteins [BR:
speg03400
]
SPYCW_3551
DNA replication proteins [BR:
speg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SPYCW_3551
Chromosome and associated proteins [BR:
speg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SPYCW_3551
DNA repair and recombination proteins [BR:
speg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SPYCW_3551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
Peptidase_C23
Motif
Other DBs
NCBI-ProteinID:
BBB10535
UniProt:
A0A2Z5UHH1
LinkDB
All DBs
Position
3671434..3671709
Genome browser
AA seq
91 aa
AA seq
DB search
MNHAELSDSVATALGLSKADAKKAVDAVFAAITDAAAKGDEVSVNGFGKFKVKESAAREG
RNPSTGETIQIAASKKLTFGAAKAVKDRLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgccgaactgtcggacagcgtcgcaaccgcacttggtctgagcaaggccgat
gcgaagaaggctgtcgatgccgttttcgctgcgatcaccgacgccgccgccaagggcgac
gaagtctcggtgaacggcttcggcaagttcaaggtcaaggaatcggccgcgcgtgaaggc
cgcaatccctcgactggcgaaaccatccagattgcggcttcgaagaagctgaccttcggc
gccgcgaaggccgtcaaggatcgtctgaacggctga
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