Sphingopyxis sp. EG6: SPYCW_3577
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Entry
SPYCW_3577 CDS
T10392
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg00470
D-Amino acid metabolism
speg00550
Peptidoglycan biosynthesis
speg01100
Metabolic pathways
speg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SPYCW_3577 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPYCW_3577 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SPYCW_3577 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
speg01011
]
SPYCW_3577 (ddl)
Enzymes [BR:
speg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SPYCW_3577 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
speg01011
]
Precursor biosynthesis
Amino acid ligase
SPYCW_3577 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
ATP-grasp_3
GARS_A
Motif
Other DBs
NCBI-ProteinID:
BBB10561
LinkDB
All DBs
Position
3705067..3705993
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AA seq
308 aa
AA seq
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MTSKHIAVLAGGFSTEREISLASGEGCAAALDAEGYQVSFVDVGYDIAEVLAKLKPDVAF
NALHGPFGEDGTIQGILEYLGIAYTHSGVLASALAMNKEKAKKIVALAGVPVAESLIVDR
RSIGNAHPMAPPYVVKPVNEGSSFGVIIVRDTGEQPTRIFGAEDWGFGDSVMVERYVPGR
ELTCAVIGDKALDVCEIITAGHAFYDHDSKYAPGGSEHVVPARIPDDIAARIKDLALTAH
REIGCRGVSRSDFRYDDRAVGGGEIIWLEINNQPGMTPTSLVPDIAARAGMSFAELVRWI
AEDASCPR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaagcatattgccgtgcttgctggaggcttttcaacggaacgggaaatctct
ctcgcttctggtgaaggctgtgccgctgcgctcgatgcggaaggctatcaggtgagcttt
gtcgatgttgggtatgacatcgccgaggttcttgccaagttgaagcccgacgtcgctttc
aatgcacttcacggtcctttcggcgaggacggcaccattcagggcatcctcgaatatctg
ggcatcgcctacactcattcgggcgtcctcgcctccgcgctggctatgaacaaggagaag
gccaagaagatcgtcgcgctcgcaggcgtgccggtcgccgaatccctcatcgttgatcgc
cgatcgatcgggaacgcccaccctatggcgccgccctatgtggtgaaacctgtcaacgag
ggatcgagcttcggcgtgatcatcgtgcgggacacgggcgaacagccgacacggattttc
ggcgctgaggattggggattcggggatagcgtcatggtcgaacgctatgttcccggaagg
gaactcacctgcgccgtcatcggcgacaaggccctggatgtgtgtgagatcatcactgcc
gggcatgccttctacgaccacgattccaaatatgcccccggcgggtcagagcatgtcgtg
ccggcgagaattcccgatgacatcgctgcgcggataaaggatttggcgctcacggcgcac
cgcgagatcgggtgccgcggcgtcagccgatcggacttccgctacgatgaccgggcggtc
ggtggcggtgagatcatctggctcgaaatcaacaaccaacccggcatgacgccaacttcg
cttgtcccggatatcgccgcaagggcaggcatgtccttcgccgaactcgttcggtggatc
gcagaagatgcgtcgtgtcctcggtag
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