Streptococcus periodonticum: EHW89_04560
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Entry
EHW89_04560 CDS
T06568
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spei
Streptococcus periodonticum
Brite
KEGG Orthology (KO) [BR:
spei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spei03032
]
EHW89_04560 (topA)
03400 DNA repair and recombination proteins [BR:
spei03400
]
EHW89_04560 (topA)
Enzymes [BR:
spei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EHW89_04560 (topA)
DNA replication proteins [BR:
spei03032
]
Prokaryotic type
DNA Topoisomerases
EHW89_04560 (topA)
DNA repair and recombination proteins [BR:
spei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EHW89_04560 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AZQ41770
UniProt:
A0A3S9MRI0
LinkDB
All DBs
Position
complement(935983..938076)
Genome browser
AA seq
697 aa
AA seq
DB search
MFTLVTKTKKKTAMKKNLVIVESPAKAKTIEKYLGRNYKVLASVGHIRDLKKSTMSIDFE
NNYEPEYINIRGKGPLINDLKKEAKKAKQVYLASDPDREGEAISWHLAHILNLDETDKNR
VVFNEITKDAVKNAFKEPRQIDMDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRV
QSVALKLIIDRENEINAFKPEEYWTIDGTFKKGTRQFQASFYGMNGKKMKLATNDDVKNV
LSHIEGDEFTVESVEKKERKRNAPLPYTTSSMQQDAANKINFRTRKTMMVAQQLYEGINI
GSGVQGLITYMRTDSTRISPVAQNEAATFITDRFGEKYSKHGSRVRNASGAQDAHEAIRP
SSVFNTPENIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMSVKLERNGVQFAANGSQV
KFDGYLAIYNDSDKNKMLPDMEKGDTVKRVNTNPEQHFTQPPARYSEATLIKTLEENGVG
RPSTYAPTIETIQKRYYVKLVSKRFEPTELGEIVNSLIVEFFPDIVNVKFTADMEAKLDD
VEVGKEQWQKVIDEFYKPFEKEVAKAETEMEKIQIKDEPAGFDCEVCGSPMVIKLGRYGK
FYACSNFPDCRHTQAIVKEIGVECPKCHKGQIIERKTKRNRLFYGCNRYPDCDFTSWDKP
IGRSCPKCGQYLVEKKVRGGGKQVVCSNGDYEEEKVK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgtttacattggtaacaaaaacaaagaaaaaaacagcaatgaaaaaaaatctggtgatt
gtagagtcgccagctaaagcaaaaacaattgaaaaatatttagggcggaactacaaagtt
ttagccagcgttggacatattcgcgatttgaaaaagtctaccatgtccatcgattttgaa
aacaactatgagccagaatatatcaatattcgcgggaaaggtcctcttatcaatgatttg
aaaaaagaagctaaaaaagcgaaacaagtctatcttgcaagtgacccggaccgtgaagga
gaagctatttcttggcatttggctcatatcttaaatctggacgagacagataaaaatcgt
gttgttttcaacgaaatcacgaaagatgcagtaaaaaatgcttttaaagaaccgcgccag
attgacatggatttggtagatgctcaacaagcgcgtcgtgtccttgaccgtattgtgggg
tactctatctctccaattctctggaaaaaggtcaaaaaaggattgtcagctggacgtgtg
caatctgttgccttgaaactcatcattgaccgtgaaaatgaaatcaatgcttttaagccg
gaagagtattggacgattgacggaactttcaaaaaaggaactcgtcaatttcaagccagc
ttttatggcatgaatggcaagaagatgaagcttgctaccaacgatgatgtaaaaaatgtt
ctttctcatattgaaggcgatgaatttactgtcgaaagcgttgagaaaaaggaacgcaag
cgcaatgctccgctgccttataccacatcatctatgcagcaggacgctgccaataaaatt
aatttccgaactcgtaagaccatgatggttgctcagcaactttatgaaggaattaatatc
ggatctggtgtgcaaggtttgattacctatatgcgtacagactccactcgtattagtccg
gtagctcaaaacgaagctgcaacctttattacagaccgttttggtgagaaatattctaaa
cacgggagtagagtccgaaatgcttctggcgcacaagacgcccatgaagcgattcgtccg
tcaagtgtgttcaacacacctgaaaatatcgcgaaatatctagataaagatcaattgaag
ctatacacgctgatttggaatcgttttgtggctagtcaaatgactgcagcagtatttgac
actatgagtgtgaagttggagcgaaacggtgttcaatttgctgcaaatggtagtcaagtt
aaattcgacggttatctagctatttacaatgattctgataagaataaaatgttgcctgat
atggaaaagggtgatacagtgaaacgggtcaacaccaatcctgaacagcatttcacacaa
ccacctgctcgttattctgaagcgaccttgattaagacattggaagaaaatggtgtcggt
cgtccgtcaacttatgcaccaacaatcgaaactattcaaaagcgctactatgtcaaatta
gtttctaagcgctttgagccaactgaattgggagaaatcgtgaattctctgattgttgaa
tttttccccgatattgtcaacgtgaaatttaccgctgatatggaagctaagctagatgat
gtagaagtaggaaaagagcaatggcaaaaggtcattgatgaattttataagccatttgaa
aaagaagttgcaaaagcagaaactgaaatggaaaaaattcaaatcaaagatgaacctgct
ggatttgactgtgaagtctgtggaagtcctatggttatcaaattgggccgttatggtaaa
ttctatgcatgtagcaattttcctgactgtcgtcatactcaagcgattgtcaaagaaatc
ggtgtagagtgtcctaagtgtcacaaagggcaaatcattgagcgcaaaaccaaacgcaat
cgccttttctatggctgcaatcgctacccagattgtgactttacttcttgggataaaccg
attggtcgctcttgtccgaaatgcggtcagtatcttgtagaaaagaaagttcgtggtgga
ggcaagcaagttgtctgcagcaatggggattacgaagaagaaaaagtaaaataa
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