Streptococcus periodonticum: EHW89_05315
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Entry
EHW89_05315 CDS
T06568
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spei
Streptococcus periodonticum
Pathway
spei03420
Nucleotide excision repair
spei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHW89_05315 (pcrA)
03430 Mismatch repair
EHW89_05315 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spei03400
]
EHW89_05315 (pcrA)
Enzymes [BR:
spei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHW89_05315 (pcrA)
DNA repair and recombination proteins [BR:
spei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHW89_05315 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
EHW89_05315 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Pox_VLTF3
Importin_rep_4
Motif
Other DBs
NCBI-ProteinID:
AZQ41910
UniProt:
A0A3Q9F466
LinkDB
All DBs
Position
complement(1084045..1086327)
Genome browser
AA seq
760 aa
AA seq
DB search
MNPLLTSMNDRQVEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKLVNPWNILAITF
TNKAAREMKERAFSLNPATEDCLIATFHSMCVRILRREADHIGYNRNFTIIDPSEQRTLM
KRILKTLNLDPKKWNERAILGTISNAKNDLIDEAAYVALAGDMYTEIVAKCYEMYQKELR
QSEAMDFDDLIMLTLRLFDKNPDVLTYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKTILQAANDVIKNNRN
RRPKNLWTQNADGEDIVYYRANDEQDEALFVAKTIDELSSTSDYVYRDFAVLYRTNAQSR
NIEEALLKANIPYTMVGGTKFYSRKEIRDVISYLNLIANTSDNISFERVVNEPKRGVGPG
TVEKIRNFAAGQEMSLLDASSQIMLSPVKGKAAQAVFDFANLILNLREQLDELTVTELVE
LVLERTGYTEQLVAQATLESQARIENIEEFLSVTKNFDEDSENDTEETGLDRLSRFLNDL
ALIADTDDGNQESSEVTLMTLHAAKGLEFPVVFIIGMEENVFPLSRAAEDEDELEEERRL
AYVGITRAEKVLFLTNANSRLLYGKTNYNRPTRFLNEISSSLLDYQGLARPANTSFKASY
VNGKTVQFGQGMSLAQALQERKRQAAPSSISSSQLPFGKNVAANQPTIDWAIGDIAHHKK
WGDGTVLEVSGSGSSQELKINFPEVGLKKLLASVAPIEKK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttattaactagtatgaatgaccgtcaggtggaggcggttcaaacaacggaa
ggtcctttgctgattatggcaggagctgggtctggaaaaacacgtgttttaacccaccgt
attgcctatttgattgatgaaaagttagtcaatccttggaatatcttggcgatcaccttt
acgaataaggctgctcgagaaatgaaggagcgggcattttccttaaatccagcaacagaa
gattgcttgattgcgacttttcactcgatgtgcgtgcggattttgcgtagggaagctgac
catatcggctataaccgaaattttacgattatcgatcctagtgagcaacggactctgatg
aaacgaattcttaaaacgctcaatttagatcctaaaaagtggaatgaacgagctatttta
ggcacgatttccaatgcgaaaaatgatttgattgatgaagcggcctatgtagctttagca
ggagatatgtacacagagattgtggcgaagtgctatgaaatgtaccaaaaggaactgcgc
cagtcagaggcgatggattttgatgacttaatcatgctgaccttgcgcctttttgataaa
aatccagatgtgttgacttattaccagcagcgctatcaatacatccatgtggacgagtat
caagatacgaaccacgctcagtaccaactagttaaactgttggcttcacgctttaaaaat
atctgtgtagttggtgatgccgaccagtctatttatggctggcgaggtgctgatatgcaa
aatatcttggactttgaaaaggattatcctgaagctaaagttgttcttctggaggaaaat
tatcgttcaactaagaccattctacaggctgctaatgatgtgatcaaaaataatcgcaac
cgtcgaccaaagaacctctggacacaaaatgctgacggtgaagatattgtttattatcgg
gctaatgatgagcaagacgaagctctctttgtagctaaaaccattgatgagctatctagc
acatctgactatgtctatcgggattttgctgttctttatcgaactaacgcccaatctcgg
aatattgaggaagctctcctaaaagctaatattccttacaccatggtgggggggactaag
ttttatagtcgtaaggaaattcgggatgtcatcagctatctcaatctcatcgctaatact
agcgacaacattagttttgagcgcgtggtcaatgagcccaagcggggagtcggaccgggt
acagtggagaaaattcgtaattttgcagctggtcaagagatgtctcttttggatgcttct
tcgcagattatgctctcacctgttaaggggaaagctgctcaggctgtttttgactttgcc
aatctcattttgaatctgcgcgagcaattggacgaattgaccgtgacagaattggtagag
ctggtgcttgaaaggactggttacaccgagcaattagtagctcaagctacgctggaaagt
caggctcggattgaaaatatcgaagaatttctttctgttactaagaattttgacgaagat
tcagaaaatgatactgaagagactggtttagacagacttagccgttttctcaatgatttg
gctttgattgcggatacagatgatggcaatcaggaaagctcggaagtgacacttatgaca
ctgcatgctgccaagggattagagtttccagtggttttcatcattggtatggaagagaat
gtctttccacttagtcgtgcggctgaagatgaagacgagctagaggaagagcgtcgattg
gcttatgtcggaattactcgtgctgaaaaagtcttgttcctaactaatgcaaactcgcgc
ctactatacggaaaaaccaactacaatcgtccaactcgttttctcaatgaaattagctca
agcttgctagattatcaaggcttggctcgacctgctaatacatcctttaaagcttcctat
gtgaatggtaaaactgttcagtttggtcaaggaatgagtctcgctcaagcattacaagaa
cgcaagcggcaagctgcaccgagcagcatttcctctagccagttgccatttggtaagaat
gtagctgctaatcagccgactattgattgggccatcggcgatattgctcaccataaaaaa
tggggagacggaacggtattggaagtgtcaggcagcggtagtagccaagaattgaaaatc
aatttcccagaggttggattaaagaaactgttggcaagtgttgcaccaattgagaaaaag
tga
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